RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 TRMT12Q53H54 448 aaKnown RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 INTS11Q5TA45 600 aaKnown RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 FBXW10Q5XX13 1052 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 CDC73Q6P1J9 531 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 MRPL14Q6P1L8 145 aaKnown RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 TNFAIP8L2Q6P589 184 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 DGAT2L6Q6ZPD8 337 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 CCDC80Q76M96 950 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 SZRD1Q7Z422 152 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 VASH2Q86V25 355 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 SPPL2CQ8IUH8 684 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 EID3Q8N140 333 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 HIPK4Q8NE63 616 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 FIG4Q92562 907 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 HOXB13Q92826 284 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 RSRC1Q96IZ7 334 aaKnown RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 MAGED4Q96JG8 741 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 VN1R1Q9GZP7 353 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 OR51I1Q9H343 314 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 ADAP2Q9NPF8 381 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 DCAF13Q9NV06 445 aaKnown RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 GIN1Q9NXP7 522 aa13.22□□□□□ -0.29
VPS26A-209ENST00000497564 IFT80Q9P2H3 777 aaPredicted RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 NXT1Q9UKK6 140 aaKnown RBP13.22□□□□□ -0.29
VPS26A-209ENST00000497564 MYOCOSA0A1B0GUC4 107 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 DHRS12A0PJE2 317 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 OR2W5A6NFC9 320 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 DUXAA6NLW8 204 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 H3BNX3 289 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 AGR2O95994 175 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 HOXB6P17509 224 aaKnown RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 SLC7A1P30825 629 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 KDELR2P33947 212 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 MAP3K8P41279 467 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 PRKAG1P54619 331 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 CASP9P55211 416 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 PCBP3P57721 371 aaKnown RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 RPS26P62854 115 aaKnown RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 SCARB2Q14108 478 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 ELOAQ14241 798 aaKnown RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 ELAVL1Q15717 326 aaKnown RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 GLIPR1L2Q4G1C9 344 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 SOWAHCQ53LP3 525 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 PRAMEF8Q5VWM4 474 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 PRAMEF7Q5VXH5 474 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 FAM198BQ6UWH4 519 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 DTX1Q86Y01 620 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 TSLPQ969D9 159 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 MAL2Q969L2 176 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 NCLNQ969V3 563 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 FAM162AQ96A26 154 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 C16orf58Q96GQ5 468 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 RNF145Q96MT1 663 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 OR7D2Q96RA2 312 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 STACQ99469 402 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 SPSB2Q99619 263 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 ULBP3Q9BZM4 244 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 SPRY4Q9C004 299 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 CCM2LQ9NUG4 571 aaPredicted RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.29
VPS26A-209ENST00000497564 P2RX2Q9UBL9 471 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 MKL2Q9ULH7 1088 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 ANGPT4Q9Y264 503 aa13.21□□□□□ -0.29
VPS26A-209ENST00000497564 TMEM247A6NEH6 219 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 TTC36A6NLP5 189 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 CNOT3O75175 753 aaKnown RBP13.2□□□□□ -0.3
VPS26A-209ENST00000497564 DLGAP3O95886 979 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 IFNA16P05015 189 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 CD63P08962 238 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 OR12D1P0DN82 309 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 LIPCP11150 499 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 PSMA4P25789 261 aaKnown RBP13.2□□□□□ -0.3
VPS26A-209ENST00000497564 SOX11P35716 441 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 DUSP8Q13202 625 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 GNA13Q14344 377 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 RCN1Q15293 331 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 MAPK11Q15759 364 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 CRB2Q5IJ48 1285 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 HEPHL1Q6MZM0 1159 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 REEP3Q6NUK4 255 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 LAPTM4BQ86VI4 370 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 CDRT4Q8N9R6 151 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
VPS26A-209ENST00000497564 OR14A16Q8NHC5 309 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 NFKBIDQ8NI38 313 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 PTPMT1Q8WUK0 201 aaPredicted RBP13.2□□□□□ -0.3
VPS26A-209ENST00000497564 SLC38A5Q8WUX1 472 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 PYDC1Q8WXC3 89 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 FBXL20Q96IG2 436 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 ANKRA2Q9H9E1 313 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 BCL2L10Q9HD36 194 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 DUSP22Q9NRW4 184 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
VPS26A-209ENST00000497564 ANAPC2Q9UJX6 822 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms