RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 DUSP8Q13202 625 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 CYLC2Q14093 348 aaPredicted RBP18.56■□□□□ 0.56
CTSD-206ENST00000497544 TLR1Q15399 786 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 MMEL1Q495T6 779 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 CRB2Q5IJ48 1285 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 ABHD17BQ5VST6 288 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 B3GNTL1Q67FW5 361 aaPredicted RBP18.56■□□□□ 0.56
CTSD-206ENST00000497544 TCTN3Q6NUS6 607 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 OR56A1Q8NGH5 318 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 GOT1L1Q8NHS2 421 aaPredicted RBP18.56■□□□□ 0.56
CTSD-206ENST00000497544 RP9Q8TA86 221 aaKnown RBP18.56■□□□□ 0.56
CTSD-206ENST00000497544 SFXN5Q8TD22 340 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 GTF2H4Q92759 462 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 ZNF552Q9H707 407 aaPredicted RBP18.56■□□□□ 0.56
CTSD-206ENST00000497544 LIN28AQ9H9Z2 209 aaKnown RBP18.56■□□□□ 0.56
CTSD-206ENST00000497544 SERHLQ9NQF3 203 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 STMN3Q9NZ72 180 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 ERVK-11Q9UQG0 969 aa18.56■□□□□ 0.56
CTSD-206ENST00000497544 CNTRLQ7Z7A1 2325 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 CEACAM4O75871 244 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 GSNP06396 782 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 POU3F2P20265 443 aaPredicted RBP18.55■□□□□ 0.56
CTSD-206ENST00000497544 PRIM2P49643 509 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 POLE2P56282 527 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 DCAF7P61962 342 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 FOXK1P85037 733 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 TP53BP2Q13625 1128 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 EBPQ15125 230 aaKnown RBP18.55■□□□□ 0.56
CTSD-206ENST00000497544 ZNHIT3Q15649 155 aaPredicted RBP18.55■□□□□ 0.56
CTSD-206ENST00000497544 IGFBP7Q16270 282 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 PAGE3Q5JUK9 113 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 ISLR2Q6UXK2 745 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 SNX32Q86XE0 403 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 OR5AK3PQ8NH89 298 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 TP53INP1Q96A56 240 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 MS4A4EQ96PG1 132 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 SLC35A5Q9BS91 424 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 WWTR1Q9GZV5 400 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 FOLH1BQ9HBA9 442 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 EQTNQ9NQ60 294 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 ABI3Q9P2A4 366 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 MYOTQ9UBF9 498 aa18.55■□□□□ 0.56
CTSD-206ENST00000497544 RNF103-CHMP3A0A140T963 221 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 WWP2O00308 870 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ERN1O75460 977 aaKnown RBP18.54■□□□□ 0.56
CTSD-206ENST00000497544 KCNH1O95259 989 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ALPPP05187 535 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ZCCHC18P0CG32 403 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 CHI3L1P36222 383 aaPredicted RBP18.54■□□□□ 0.56
CTSD-206ENST00000497544 CDKN2CP42773 168 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 NR0B1P51843 470 aaKnown RBP18.54■□□□□ 0.56
CTSD-206ENST00000497544 MLF1P58340 268 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ZNF155Q12901 538 aaPredicted RBP18.54■□□□□ 0.56
CTSD-206ENST00000497544 STX5Q13190 355 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ACER2Q5QJU3 275 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ZCCHC12Q6PEW1 402 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 C6orf120Q7Z4R8 191 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 LGI4Q8N135 537 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 CLEC4FQ8N1N0 589 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 DNAJB8Q8NHS0 232 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ADIPOR1Q96A54 375 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 LMF1Q96S06 567 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 ITPAQ9BY32 194 aa18.54■□□□□ 0.56
CTSD-206ENST00000497544 FAF1Q9UNN5 650 aaPredicted RBP18.54■□□□□ 0.56
CTSD-206ENST00000497544 YARS2Q9Y2Z4 477 aaKnown RBP18.54■□□□□ 0.56
CTSD-206ENST00000497544 PCDHGA9Q9Y5G4 932 aaKnown RBP18.54■□□□□ 0.56
CTSD-206ENST00000497544 A0A096LPI6 279 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 ASPDHA6ND91 283 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 TTC36A6NLP5 189 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 BBIP1A8MTZ0 92 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 NME6O75414 186 aaPredicted RBP18.53■□□□□ 0.56
CTSD-206ENST00000497544 ITGA10O75578 1167 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 PSMG1O95456 288 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 HMGN2P05204 90 aaKnown RBP18.53■□□□□ 0.56
CTSD-206ENST00000497544 COX4I1P13073 169 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 DRD5P21918 477 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 PPICP45877 212 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 CBX1P83916 185 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 DNAJC14Q6Y2X3 702 aaPredicted RBP18.53■□□□□ 0.56
CTSD-206ENST00000497544 LINC00696Q6ZRV3 163 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 CMTM5Q96DZ9 223 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 LCORQ96JN0 433 aaPredicted RBP18.53■□□□□ 0.56
CTSD-206ENST00000497544 PHF12Q96QT6 1004 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 EPS8L2Q9H6S3 715 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 DTX4Q9Y2E6 619 aa18.53■□□□□ 0.56
CTSD-206ENST00000497544 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 TMEM200CA6NKL6 621 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 OR2J2O76002 312 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 KRT75O95678 551 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 KRT16P08779 473 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 SFTPCP11686 197 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 MATN1P21941 496 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 SOX11P35716 441 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 NFYCQ13952 458 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 LASP1Q14847 261 aaKnown RBP18.52■□□□□ 0.56
CTSD-206ENST00000497544 PIGGQ5H8A4 983 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 ANGPTL8Q6UXH0 198 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 C16orf47Q6ZP98 133 aaPredicted RBP18.52■□□□□ 0.56
CTSD-206ENST00000497544 TREML1Q86YW5 311 aa18.52■□□□□ 0.56
CTSD-206ENST00000497544 SLC44A2Q8IWA5 706 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms