RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 ABCD2Q9UBJ2 740 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 TEKT2Q9UIF3 430 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 LIPT1Q9Y234 373 aa18.31■□□□□ 0.52
SCAMP3-209ENST00000497470 TAF4O00268 1085 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 CEACAM4O75871 244 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 GSNP06396 782 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 CT45A8P0DMV1 189 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 CT45A9P0DMV2 189 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 MATN1P21941 496 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 CPOXP36551 454 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 KHKP50053 298 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 PSG6Q00889 435 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 RBBP4Q09028 425 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 EXOSC7Q15024 291 aaKnown RBP18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 LACTB2Q53H82 288 aaPredicted RBP18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 CT45A2Q5DJT8 189 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 PRAMEF8Q5VWM4 474 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 PRAMEF7Q5VXH5 474 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 HLA-DQA1Q5Y7H0 255 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 NET1Q7Z628 596 aaPredicted RBP18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 CHDHQ8NE62 594 aaPredicted RBP18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 ZNF354BQ96LW1 612 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 MESP1Q9BRJ9 268 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 SPAG4Q9NPE6 437 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 POLE3Q9NRF9 147 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 MYOTQ9UBF9 498 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 MRTO4Q9UKD2 239 aaKnown RBP18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 RAXQ9Y2V3 346 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 KCNMB2Q9Y691 235 aa18.3■□□□□ 0.52
SCAMP3-209ENST00000497470 TRBV11-1A0A0K0K1C0 115 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 B2RBV5 119 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 ITGB2P05107 769 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 ALOX5P09917 674 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 TRHRP34981 398 aaPredicted RBP18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 Q0VFX4 171 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 SRSF6Q13247 344 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 GNA13Q14344 377 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 LASP1Q14847 261 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 DNAL1Q4LDG9 190 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 PIGGQ5H8A4 983 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 CRB2Q5IJ48 1285 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 IRAK1BP1Q5VVH5 260 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 HEPHL1Q6MZM0 1159 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC30A8Q8IWU4 369 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 GPALPP1Q8IXQ4 340 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 TAGAPQ8N103 731 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 ADAMTS15Q8TE58 950 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 PSMF1Q92530 271 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 RNF32Q9H0A6 362 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 ING2Q9H160 280 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 Q9N2J8 555 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 EXD2Q9NVH0 621 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 TAS2R1Q9NYW7 299 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 PRPF19Q9UMS4 504 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 YARS2Q9Y2Z4 477 aaKnown RBP18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 PCDHGB7Q9Y5F8 929 aa18.29■□□□□ 0.52
SCAMP3-209ENST00000497470 AKAP13Q12802 2813 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 TMEM200CA6NKL6 621 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 ABCB7O75027 752 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 PRKAG1P54619 331 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 PSMD4P55036 377 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 EEFSECP57772 596 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 PSME3P61289 254 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 MEP1AQ16819 746 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 GTDC1Q4AE62 458 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 CCDC121Q6ZUS5 278 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 RPS19BP1Q86WX3 136 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 HPS6Q86YV9 775 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC15A3Q8IY34 581 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 GALNT16Q8N428 558 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 ZNF321PQ8N8H1 164 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 RBM15BQ8NDT2 890 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 OR5AK3PQ8NH89 298 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 FAM110BQ8TC76 370 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC22A8Q8TCC7 542 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 APOBEC4Q8WW27 367 aaKnown RBP18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 LMF1Q96S06 567 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 BTBD2Q9BX70 525 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 MMADHCQ9H3L0 296 aaPredicted RBP18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 TRIM45Q9H8W5 580 aaPredicted RBP18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 TMEM181Q9P2C4 612 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 WDFY3Q8IZQ1 3526 aa18.28■□□□□ 0.52
SCAMP3-209ENST00000497470 PCSK5Q92824 1860 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 TNFRSF21O75509 655 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 ITGAMP11215 1152 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 SOX11P35716 441 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 PIGAP37287 484 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 TMED10P49755 219 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 NRG3P56975 720 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 MLF1P58340 268 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 MRPS22P82650 360 aaKnown RBP18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 ATAD3BQ5T9A4 648 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 ERICH5Q6P6B1 374 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 DNAJC14Q6Y2X3 702 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 BNC2Q6ZN30 1099 aaPredicted RBP18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 CALHM3Q86XJ0 350 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 RNF130Q86XS8 419 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 SLC16A11Q8NCK7 471 aa18.27■□□□□ 0.52
SCAMP3-209ENST00000497470 SIMC1Q8NDZ2 872 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms