RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 ZNF397Q8NF99 534 aaPredicted RBP2.62□□□□□ -1.99
PHC3-216ENST00000497171 BEST4Q8NFU0 473 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 ZNF671Q8TAW3 534 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 TAF4BQ92750 862 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 TOMM40LQ969M1 308 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 TADA1Q96BN2 335 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 C14orf79Q96F83 325 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 RAB11FIP5Q9BXF6 653 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 ERVK-6Q9BXR3 956 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 PUS3Q9BZE2 481 aaKnown RBP2.62□□□□□ -1.99
PHC3-216ENST00000497171 ALG9Q9H6U8 611 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 GNB4Q9HAV0 340 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 HPF1Q9NWY4 346 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 ZNF490Q9ULM2 529 aaPredicted RBP2.62□□□□□ -1.99
PHC3-216ENST00000497171 SPATA2Q9UM82 520 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 AURKCQ9UQB9 309 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 SYNJ2O15056 1496 aa2.62□□□□□ -1.99
PHC3-216ENST00000497171 PTPRUQ92729 1446 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 IGHV3-16A0A0C4DH30 117 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 FAM230AA0A1W2PPH8 454 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 RGSL1A5PLK6 1076 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ANKRD30BLA7E2S9 258 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 FOXI3A8MTJ6 420 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 E9PAM4 449 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 PHF1O43189 567 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 SH3BGRLO75368 114 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 TOM1L1O75674 476 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 TRIM16O95361 564 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 IGSF6O95976 241 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 HPP00738 406 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 PTMAP06454 111 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 CA3P07451 260 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 HCKP08631 526 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 HOXD4P09016 255 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 ANXA4P09525 319 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 FUT1P19526 365 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 PTMSP20962 102 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 DNAJB1P25685 340 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 SHC1P29353 583 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 MAT2AP31153 395 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 CD86P42081 329 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 HTR5AP47898 357 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ARHGDIAP52565 204 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 VCPP55072 806 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 HAND2P61296 217 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 NUCB2P80303 420 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ZFP36L1Q07352 338 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 COX10Q12887 443 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 EIF2B1Q14232 305 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 TTC31Q49AM3 519 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 NHLRC3Q5JS37 347 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ZNF506Q5JVG8 444 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 SEL1L2Q5TEA6 688 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 TAF3Q5VWG9 929 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 SLX4IPQ5VYV7 408 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ZNF774Q6NX45 483 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 PNCKQ6P2M8 343 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 RFWD3Q6PCD5 774 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ADAMTSL5Q6ZMM2 481 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 PRSS48Q7RTY5 328 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 SYVN1Q86TM6 617 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 MISPQ8IVT2 679 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 POM121L12Q8N7R1 296 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ZNF491Q8N8L2 437 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 FAM71CQ8NEG0 241 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 C17orf47Q8NEP4 570 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 OR52B4Q8NGK2 314 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 DQX1Q8TE96 717 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 GIPC3Q8TF64 312 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ITLN1Q8WWA0 313 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 MCHR2Q969V1 340 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 NCLNQ969V3 563 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 MRPL38Q96DV4 380 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 C16orf45Q96MC5 204 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 C19orf43Q9BQ61 176 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 FAM173AQ9BQD7 235 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 TRIM6Q9C030 488 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 RPAP3Q9H6T3 665 aaPredicted RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 FAM114A2Q9NRY5 505 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 C1orf123Q9NWV4 160 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 ARMCX1Q9P291 453 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 P2RX2Q9UBL9 471 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 CIDEBQ9UHD4 219 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 KLK13Q9UKR3 277 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 MGAT4BQ9UQ53 548 aa2.61□□□□□ -1.99
PHC3-216ENST00000497171 MRPL11Q9Y3B7 192 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 TDRD15B5MCY1 1934 aaKnown RBP2.61□□□□□ -1.99
PHC3-216ENST00000497171 NPIPA5A0A0B4J1W7 369 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 TTC26A0AVF1 554 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 LRIT2A6NDA9 550 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 MFSD2BA6NFX1 497 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 CCT8L1PA6NM43 557 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 ZNF487B1APH4 448 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 NPIPA5E9PKD4 350 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 C11orf98E9PRG8 122 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 H0YL77 283 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 VPS26AO75436 327 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 DIRAS3O95661 229 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 IFNB1P01574 187 aa2.6□□□□□ -1.99
PHC3-216ENST00000497171 SLC35G4P0C7Q5 338 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms