RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	CILP	O75339	1184 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CD8B	P10966	210 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MAPK3	P27361	379 aa	Predicted RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DDT	P30046	118 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TSPAN7	P41732	249 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GNG10	P50151	68 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CDH11	P55287	796 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SSX1	Q16384	188 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NKG7	Q16617	165 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C14orf28	Q4W4Y0	310 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PRAMEF17	Q5VTA0	474 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	KIAA0319	Q5VV43	1072 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FAM46C	Q5VWP2	391 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FRMPD2B	Q6IN97	320 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TAC4	Q86UU9	113 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PIM3	Q86V86	326 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TGIF2LX	Q8IUE1	241 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PUSL1	Q8N0Z8	303 aa	Known RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MRPS31	Q92665	395 aa	Known RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	IPPK	Q9H8X2	491 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NOX3	Q9HBY0	568 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549		A0A1B0GUL6	1792 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	THSD7A	Q9UPZ6	1657 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LRRTM2	O43300	516 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ECI2	O75521	394 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NTSR2	O95665	410 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MGMT	P16455	207 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CLDN8	P56748	225 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR2B8P	P59922	312 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	VLDLR	P98155	873 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GANAB	Q14697	944 aa	Known RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PPA1	Q15181	289 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	KYAT1	Q16773	422 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ST3GAL2	Q16842	350 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SAPCD1	Q5SSQ6	148 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SFRP5	Q5T4F7	317 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PTRHD1	Q6GMV3	140 aa	Known RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HEPHL1	Q6MZM0	1159 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C1orf94	Q6P1W5	598 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CATSPERG	Q6ZRH7	1159 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CARF	Q8N187	725 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FAM181A	Q8N9Y4	354 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR5M3	Q8NGP4	307 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C1orf216	Q8TAB5	229 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FCAMR	Q8WWV6	532 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR8D1	Q8WZ84	308 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	WNT8B	Q93098	351 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ESAM	Q96AP7	390 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	POM121	Q96HA1	1249 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CDK15	Q96Q40	435 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF382	Q96SR6	550 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ELF4	Q99607	663 aa	Predicted RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ELOVL4	Q9GZR5	314 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OPN3	Q9H1Y3	402 aa	Predicted RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	EXO5	Q9H790	373 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HEXA-AS1	Q9H8Q6	139 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TNFRSF12A	Q9NP84	129 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	METTL1	Q9UBP6	276 aa	Known RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SLC2A6	Q9UGQ3	507 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TREH	O43280	583 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SOX14	O95416	240 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	EGF	P01133	1207 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PIGR	P01833	764 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C6	P13671	934 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	IFNGR1	P15260	489 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CD1D	P15813	335 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RPS2	P15880	293 aa	Known RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CRABP1	P29762	137 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CLCN7	P51798	805 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LUM	P51884	338 aa	Predicted RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DGKE	P52429	567 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	IKZF1	Q13422	519 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DDX39B	Q13838	428 aa	Known RBP	7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C18orf63	Q68DL7	685 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TRIM40	Q6P9F5	258 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MPZL3	Q6UWV2	235 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GAREM2	Q75VX8	874 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MTSS1L	Q765P7	747 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LIMS2	Q7Z4I7	341 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ADGRG2	Q8IZP9	1017 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF615	Q8N8J6	731 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZFP41	Q8N8Y5	198 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CHTF18	Q8WVB6	975 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ADAM2	Q99965	735 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SLITRK2	Q9H156	845 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DBNDD1	Q9H9R9	158 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	BCOR	Q6W2J9	1755 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549		A0A0U1RQS6	177 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CARNS1	A5YM72	827 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MED6	O75586	246 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ATXN1L	P0C7T5	689 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TPT1	P13693	172 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NDUFB7	P17568	137 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ITGB7	P26010	798 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GJA5	P36382	358 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ART1	P52961	327 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CTSC	P53634	463 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	WNT3A	P56704	352 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RPS25	P62851	125 aa	Known RBP	7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms