RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PACS2Q86VP3 889 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 CCNYL1Q8N7R7 359 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 NAXEQ8NCW5 288 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 KAT2AQ92830 837 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 OSBPL11Q9BXB4 747 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 PRDM14Q9GZV8 571 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 C12orf65Q9H3J6 166 aaKnown RBP13.04□□□□□ -0.32
VTI1A-209ENST00000496445 METTL7AQ9H8H3 244 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 PFDN4Q9NQP4 134 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 SIRT5Q9NXA8 310 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 PRODH2Q9UF12 536 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 DCDC2Q9UHG0 476 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 SLC6A5Q9Y345 797 aa13.04□□□□□ -0.32
VTI1A-209ENST00000496445 SNPHO15079 494 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 TO15178 435 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 PLIN3O60664 434 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 TRAPPC6AO75865 159 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 POU3F2P20265 443 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-209ENST00000496445 DRD5P21918 477 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 PPICP45877 212 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 SLCO1A2P46721 670 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 DLX5P56178 289 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 CORO7P57737 925 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 DCAF7P61962 342 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 BTKQ06187 659 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 WIPI1Q5MNZ9 446 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-209ENST00000496445 TIGD3Q6B0B8 471 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 VASNQ6EMK4 673 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 NPSR1Q6W5P4 371 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 NUP54Q7Z3B4 507 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 RELL2Q8NC24 303 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-209ENST00000496445 EPS8L3Q8TE67 593 aaKnown RBP13.03□□□□□ -0.32
VTI1A-209ENST00000496445 TMBIM1Q969X1 311 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 VSTM2LQ96N03 204 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 BTBD9Q96Q07 612 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 TIMP4Q99727 224 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 UGT2B28Q9BY64 529 aa13.03□□□□□ -0.32
VTI1A-209ENST00000496445 GPR55Q9Y2T6 319 aaPredicted RBP13.03□□□□□ -0.32
VTI1A-209ENST00000496445 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 PRAMEF25A6NGN4 478 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 ICOSLGO75144 302 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 ANXA4P09525 319 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-209ENST00000496445 CT45A8P0DMV1 189 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 CT45A9P0DMV2 189 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 BMP7P18075 431 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 DDCP20711 480 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 ZNF763Q0D2J5 394 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 SLC25A35Q3KQZ1 300 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 CT45A2Q5DJT8 189 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 SLC30A6Q6NXT4 461 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 WDR53Q7Z5U6 358 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-209ENST00000496445 TDRPQ86YL5 185 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 CNPY4Q8N129 248 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 EIF1ADQ8N9N8 165 aaKnown RBP13.02□□□□□ -0.33
VTI1A-209ENST00000496445 WDSUB1Q8N9V3 476 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 FAM83FQ8NEG4 500 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-209ENST00000496445 TNIP2Q8NFZ5 429 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 OR7G2Q8NG99 324 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 OR1J4Q8NGS1 313 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.33
VTI1A-209ENST00000496445 UBLCP1Q8WVY7 318 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-209ENST00000496445 ERP27Q96DN0 273 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 CCDC126Q96EE4 140 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 FOLH1BQ9HBA9 442 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 SLC35C2Q9NQQ7 365 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 KLRF1Q9NZS2 232 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 MAPRE3Q9UPY8 281 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 L3MBTL1Q9Y468 752 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 POLR3HQ9Y535 204 aaPredicted RBP13.02□□□□□ -0.33
VTI1A-209ENST00000496445 SPG11Q96JI7 2443 aa13.02□□□□□ -0.33
VTI1A-209ENST00000496445 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 OR6C70A6NIJ9 312 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 AHRRA9YTQ3 701 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 B4DXG7 233 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 FAM47E-STBD1D6RA91 191 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CDH16O75309 829 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 ERN1O75460 977 aaKnown RBP13.01□□□□□ -0.33
VTI1A-209ENST00000496445 EPPINO95925 133 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CAPN3P20807 821 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CEACAM8P31997 349 aaPredicted RBP13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CRHR1P34998 444 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 GSTM5P46439 218 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 NAGLUP54802 743 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 DNAJB13P59910 316 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 SNTA1Q13424 505 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 TOMM20Q15388 145 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CCDC153Q494R4 210 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 FAM71E1Q6IPT2 247 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 POMZP3Q6PJE2 187 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 TRIM46Q7Z4K8 759 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CDH24Q86UP0 819 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 SAMD14Q8IZD0 417 aaPredicted RBP13.01□□□□□ -0.33
VTI1A-209ENST00000496445 FAM9CQ8IZT9 166 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 CDC26Q8NHZ8 85 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 RNF138Q8WVD3 245 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 SLC35A4Q96G79 324 aa13.01□□□□□ -0.33
VTI1A-209ENST00000496445 WDYHV1Q96HA8 205 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms