RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PRPS1L1P21108 318 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 NDUFV1P49821 464 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ZP1P60852 638 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 SHC2P98077 582 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 FABP5Q01469 135 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 MC2RQ01718 297 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 DSC1Q08554 894 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 PTPRCAPQ14761 206 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 HEPACAMQ14CZ8 416 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 DHRS7BQ6IAN0 325 aaPredicted RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 HAGHLQ6PII5 290 aaPredicted RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 ALKAL1Q6UXT8 129 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 TSPAN33Q86UF1 283 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 TOMM5Q8N4H5 51 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 PNPLA1Q8N8W4 532 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 B3GALNT2Q8NCR0 500 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 C11orf65Q8NCR3 313 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ESAMQ96AP7 390 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 TRIB3Q96RU7 358 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 HBEGFQ99075 208 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 CHST8Q9H2A9 424 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ACER3Q9NUN7 267 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ERVK-19Q9WJR5 959 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 CA5BQ9Y2D0 317 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 EXOSC1Q9Y3B2 195 aaKnown RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 RAI2Q9Y5P3 530 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 RALGAPA2Q2PPJ7 1873 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ARL5CA6NH57 179 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 M0R129 80 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 GALR3O60755 368 aaPredicted RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 PEX14O75381 377 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 OR2A4O95047 310 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 NPR2P20594 1047 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 IGFBP6P24592 240 aaPredicted RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 CD86P42081 329 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 PITPNAQ00169 270 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 HMGCS1Q01581 520 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 LGALS3BPQ08380 585 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ACSM1Q08AH1 577 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 SLC36A2Q495M3 483 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ATAT1Q5SQI0 421 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 SPOUT1Q5T280 376 aaKnown RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 ZC3H14Q6PJT7 736 aaKnown RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 ZNF280BQ86YH2 543 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 NPAS4Q8IUM7 802 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 SPAG16Q8N0X2 631 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 CRIPAKQ8N1N5 446 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 STK40Q8N2I9 435 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 SVBPQ8N300 66 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 KAT2AQ92830 837 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 TMEM203Q969S6 136 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 LINGO1Q96FE5 620 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 CDKN2AIPNLQ96HQ2 116 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 OR2A7Q96R45 310 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 IFT27Q9BW83 186 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ULBP1Q9BZM6 244 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 TINAGL1Q9GZM7 467 aaPredicted RBP8.57□□□□□ -1.04
HPS4-217ENST00000496385 ANKRD19PQ9H560 264 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 GOLGA2P5Q9HBQ8 144 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 TMEM161AQ9NX61 479 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 ZSCAN32Q9NX65 697 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 MYO7AQ13402 2215 aa8.57□□□□□ -1.04
HPS4-217ENST00000496385 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 YJEFN3A6XGL0 299 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 AGAP14A8MT82 685 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RFXAPO00287 272 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RGS11O94810 467 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ATG12O94817 140 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 GADD45GO95257 159 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 IGHV2-70P01814 119 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 TFP02787 698 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ALDOBP05062 364 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 MMP2P08253 660 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 PRF1P14222 555 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 LMO2P25791 158 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 SPAM1P38567 509 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 XCR1P46094 333 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 MTNR1BP49286 362 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CRYBA2P53672 197 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 C21orf58P58505 322 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 FAM189BP81408 668 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 DCDP81605 110 aaKnown RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 TAP2Q03519 686 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RELQ04864 619 aaPredicted RBP8.56□□□□□ -1.04
HPS4-217ENST00000496385 LRRC74AQ0VAA2 488 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RAB40BQ12829 278 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RNF212Q495C1 297 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 RAB41Q5JT25 222 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 AVPI1Q5T686 147 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 MARC1Q5VT66 337 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 BAIAP2L2Q6UXY1 529 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 CLEC20AQ6ZU45 233 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 Q7L0L9 218 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 TEX26Q8N6G2 289 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 ARIH2OSQ8N7S6 290 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 AQP11Q8NBQ7 271 aa8.56□□□□□ -1.04
HPS4-217ENST00000496385 PXT1Q8NFP0 134 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms