RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 WLSQ5T9L3 541 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 WDR25Q64LD2 544 aaPredicted RBP3.05□□□□□ -1.92
CLK1-214ENST00000496205 STEAP1BQ6NZ63 245 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 LCLAT1Q6UWP7 414 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
CLK1-214ENST00000496205 NANOGNBQ7Z5D8 188 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 GTSCR1Q86UQ5 136 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 VPS36Q86VN1 386 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 BBS5Q8N3I7 341 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 LRRC17Q8N6Y2 441 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 Q8NBF4 154 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 COLGALT1Q8NBJ5 622 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 ZNF248Q8NDW4 579 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 PRSS33Q8NF86 280 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 OR6F1Q8NGZ6 308 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 GOLGA5Q8TBA6 731 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 CHPT1Q8WUD6 406 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 NCLNQ969V3 563 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 PIWIL1Q96J94 861 aaKnown RBP3.05□□□□□ -1.92
CLK1-214ENST00000496205 C18orf12Q96KH6 178 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 CAPNS2Q96L46 248 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 SENP8Q96LD8 212 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 TTC25Q96NG3 672 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 ALKBH3Q96Q83 286 aaPredicted RBP3.05□□□□□ -1.92
CLK1-214ENST00000496205 TNFRSF13CQ96RJ3 184 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 ATOH8Q96SQ7 321 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 RHOXF2Q9BQY4 288 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 CBWD1Q9BRT8 395 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 SYT11Q9BT88 431 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 NLNQ9BYT8 704 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 LIME1Q9H400 295 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 CLSTN2Q9H4D0 955 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 WDR76Q9H967 626 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 WDR41Q9HAD4 459 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 KCNK13Q9HB14 408 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 UBE2TQ9NPD8 197 aaPredicted RBP3.05□□□□□ -1.92
CLK1-214ENST00000496205 NDE1Q9NXR1 346 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 GTSE1Q9NYZ3 720 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 NIP7Q9Y221 180 aaKnown RBP eCLIP3.05□□□□□ -1.92
CLK1-214ENST00000496205 NAALAD2Q9Y3Q0 740 aa3.05□□□□□ -1.92
CLK1-214ENST00000496205 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.05□□□□□ -1.92
CLK1-214ENST00000496205 RAD54L2Q9Y4B4 1467 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 PTCH1Q13635 1447 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 SALL1Q9NSC2 1324 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 IGLV7-46A0A075B6I9 117 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 LOC105371242A0A075B767 164 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 ANKRD30BLA7E2S9 258 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 ARHGEF33A8MVX0 844 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 K7EQM0 130 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 ARPC1BO15143 372 aaKnown RBP3.04□□□□□ -1.92
CLK1-214ENST00000496205 INPP4BO15327 924 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 BUB1O43683 1085 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 MTRF1O75570 445 aaKnown RBP3.04□□□□□ -1.92
CLK1-214ENST00000496205 CIB2O75838 187 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 KIAA0754O94854 1291 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 RRASP10301 218 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 GZMAP12544 262 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 CCDC130P13994 396 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 RPA2P15927 270 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 GALP22466 123 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 DPP4P27487 766 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 PRDX2P32119 198 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 RFC4P35249 363 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 ACADSBP45954 432 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 NPY2RP49146 381 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 CSRP3P50461 194 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 METAP1P53582 386 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 CRYBA2P53672 197 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 ZNF146Q15072 292 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 PPP1R7Q15435 360 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 POM121L1PQ3SYA9 428 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 SULT1C3Q6IMI6 304 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 PAQR9Q6ZVX9 377 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 ZFAND4Q86XD8 727 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 PHYHIPQ92561 330 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 MCHR2Q969V1 340 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 POM121L2Q96KW2 1035 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 AGAP4Q96P64 663 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 RCHY1Q96PM5 261 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 ZNF607Q96SK3 696 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 FGFBP2Q9BYJ0 223 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 CRNKL1Q9BZJ0 848 aaKnown RBP3.04□□□□□ -1.92
CLK1-214ENST00000496205 UPF3AQ9H1J1 476 aaKnown RBP3.04□□□□□ -1.92
CLK1-214ENST00000496205 VCX2Q9H322 139 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 HPS4Q9NQG7 708 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 STARD5Q9NSY2 213 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 RAB20Q9NX57 234 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 TEX10Q9NXF1 929 aaPredicted RBP3.04□□□□□ -1.92
CLK1-214ENST00000496205 GDAP2Q9NXN4 497 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 NUDT4Q9NZJ9 180 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 LHX3Q9UBR4 397 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 MIOXQ9UGB7 285 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 SLC6A5Q9Y345 797 aa3.04□□□□□ -1.92
CLK1-214ENST00000496205 FGD5Q6ZNL6 1462 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 PTPRUQ92729 1446 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 IGHV4-30-2A0A087WSY4 118 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 FAM240BA0A1B0GVZ2 78 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 MBLAC1A4D2B0 266 aaPredicted RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 FAM47DPA6NHR8 397 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 PCP4L1A6NKN8 68 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms