RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ZNF354BQ96LW1 612 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 CMKLR1Q99788 373 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 ZPBPQ9BS86 351 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 NDC1Q9BTX1 674 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 GABARAPL1Q9H0R8 117 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF556Q9HAH1 456 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 NTN4Q9HB63 628 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 FAM60AQ9NP50 221 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 ENAMQ9NRM1 1142 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 GIN1Q9NXP7 522 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 NDUFA13Q9P0J0 144 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 SEMA5BQ9P283 1151 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 DKK4Q9UBT3 224 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 TMCC3Q9ULS5 477 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 C19orf53Q9UNZ5 99 aaPredicted RBP9.61□□□□□ -0.87
HDAC3-214ENST00000495485 PCDHGA8Q9Y5G5 932 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 SPTBP11277 2137 aa9.61□□□□□ -0.87
HDAC3-214ENST00000495485 WDFY3Q8IZQ1 3526 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 IGHV5-51A0A0C4DH38 117 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 TMEM8BA6NDV4 472 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 SGK494L7N484 410 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 TNFRSF11BO00300 401 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 UPK1AO00322 258 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 RDH16O75452 317 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 PRKRAO75569 313 aaKnown RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 OR2B3O76000 313 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 DXOO77932 396 aaKnown RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 ALPLP05186 524 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 ALPPP05187 535 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 ALOX5P09917 674 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 UBTFL6P0CB48 400 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 CSTF2P33240 577 aaKnown RBP eCLIP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 GALNSP34059 522 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 RAB15P59190 212 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 PPP1CAP62136 330 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 VLDLRP98155 873 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 ACY1Q03154 408 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 SLC13A2Q13183 592 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 TOP3AQ13472 1001 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 C16orf72Q14CZ0 275 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 RTP5Q14D33 572 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 NKG7Q16617 165 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 DEFB110Q30KQ9 67 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 AMZ1Q400G9 498 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 VTCN1Q7Z7D3 282 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 C8orf59Q8N0T1 100 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 TAGAPQ8N103 731 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 D2HGDHQ8N465 521 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 Q8N9G6 341 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 AGBL5Q8NDL9 886 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 OR9A2Q8NGT5 310 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 OR9A4Q8NGU2 314 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 FAM110BQ8TC76 370 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 GIPC3Q8TF64 312 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 KLHL6Q8WZ60 621 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 RAB8BQ92930 207 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 UCN3Q969E3 161 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 TAMM41Q96BW9 452 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 C7orf34Q96L11 122 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 DGAT2Q96PD7 388 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 OR1F2PQ96R84 312 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 OR7D2Q96RA2 312 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF300Q96RE9 604 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 STACQ99469 402 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 PINK1Q9BXM7 581 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 SLC7A5P2Q9GIP4 190 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 MTHFD2LQ9H903 347 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 POLE3Q9NRF9 147 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 PRTFDC1Q9NRG1 225 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 SRPK3Q9UPE1 567 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 WASF3Q9UPY6 502 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 MYRFQ9Y2G1 1151 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 SH3GLB1Q9Y371 365 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 GPC6Q9Y625 555 aaPredicted RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 ENPP4Q9Y6X5 453 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 ASPMQ8IZT6 3477 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 MAP1BP46821 2468 aaKnown RBP9.6□□□□□ -0.87
HDAC3-214ENST00000495485 FRYQ5TBA9 3013 aa9.6□□□□□ -0.87
HDAC3-214ENST00000495485 A0A0A6YYC8 382 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 ZNF860A6NHJ4 632 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 B4E171 279 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 TMEM150CB9EJG8 249 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 I3L1I5 382 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 SYT5O00445 386 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 PRAMEF10O60809 474 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 CSO75390 466 aaKnown RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 MFN2O95140 757 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 GADD45GO95257 159 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 OXSR1O95747 527 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 OPN1SWP03999 348 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 FESP07332 822 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 NELFEP18615 380 aaKnown RBP9.59□□□□□ -0.87
HDAC3-214ENST00000495485 IGFBP5P24593 272 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 CD82P27701 267 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 TSPAN7P41732 249 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 GABRA4P48169 554 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 KCNJ5P48544 419 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 GFERP55789 205 aa9.59□□□□□ -0.87
HDAC3-214ENST00000495485 RPS26P62854 115 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms