RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-213	ENST00000495232	NME2P1	O60361	137 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	NADK	O95544	446 aa	Predicted RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CRYAB	P02511	175 aa	Known RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	IL6	P05231	212 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	FBXO45	P0C2W1	286 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	NCF2	P19878	526 aa	Predicted RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	NME2	P22392	152 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ABCD3	P28288	659 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SOAT1	P35610	550 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SOX18	P35713	384 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CCT3	P49368	545 aa	Known RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PRIM2	P49643	509 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	IRX1	P78414	480 aa	Predicted RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	LRRC74A	Q0VAA2	488 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SPANXN4	Q5MJ08	99 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SLC22A10	Q63ZE4	541 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MDGA2	Q7Z553	956 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PRR22	Q8IZ63	422 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	BCORP1	Q8N888	145 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PSD4	Q8NDX1	1056 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	OR4A15	Q8NGL6	344 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	OR5M3	Q8NGP4	307 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	JADE3	Q92613	823 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MOAP1	Q96BY2	351 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SNRNP40	Q96DI7	357 aa	Known RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CHMP6	Q96FZ7	201 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TEX37	Q96LM6	180 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	VSTM2L	Q96N03	204 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MS4A4E	Q96PG1	132 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	BTBD9	Q96Q07	612 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	HES7	Q9BYE0	225 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232		Q9N2J8	555 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SACM1L	Q9NTJ5	587 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	FGFR1OP2	Q9NVK5	253 aa		11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	FAM120C	Q9NX05	1096 aa	Known RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MRTO4	Q9UKD2	239 aa	Known RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.15	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PEX1	O43933	1283 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	ZNF354A	O60765	605 aa	Predicted RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	NME6	O75414	186 aa	Predicted RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	REM1	O75628	298 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CPSF4	O95639	269 aa	Known RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	PGR	P06401	933 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CT45A8	P0DMV1	189 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CT45A9	P0DMV2	189 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	NAGA	P17050	411 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	IL12B	P29460	328 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CORO7	P57737	925 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	HBA1	P69905	142 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	MRPS22	P82650	360 aa	Known RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	TP53BP2	Q13625	1128 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	NTRK2	Q16620	822 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	ZNF791	Q3KP31	576 aa	Predicted RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CT45A2	Q5DJT8	189 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	ZCCHC12	Q6PEW1	402 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	TMEM64	Q6YI46	380 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	ANKRD46	Q86W74	232 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CLECL1	Q8IZS7	167 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	SLC34A3	Q8N130	599 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	TRIML2	Q8N7C3	387 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CDRT4	Q8N9R6	151 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	OR56A1	Q8NGH5	318 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	DNAJB8	Q8NHS0	232 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	RFWD2	Q8NHY2	731 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	SFXN5	Q8TD22	340 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	GRHL3	Q8TE85	626 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	STON2	Q8WXE9	905 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	SLC9A6	Q92581	669 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	DIO2	Q92813	273 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	OMA1	Q96E52	524 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	FAM120B	Q96EK7	910 aa	Known RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	OR52E6	Q96RD3	313 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	RABEP2	Q9H5N1	569 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CXorf36	Q9H7Y0	433 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	RMND5A	Q9H871	391 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CNIH4	Q9P003	139 aa		11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232	FAF1	Q9UNN5	650 aa	Predicted RBP	11.14	□□□□□ -0.63
CSNK1E-213	ENST00000495232		C9JVG2	144 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	T	O15178	435 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	HS6ST1	O60243	411 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	ABCB7	O75027	752 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	PPM1B	O75688	479 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	KCNH1	O95259	989 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	PSMG1	O95456	288 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	KRT16	P08779	473 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	ALOX5	P09917	674 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	CNR1	P21554	472 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	GABRA3	P34903	492 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	MEOX1	P50221	254 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	POLR2J	P52435	117 aa	Known RBP	11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	DGKQ	P52824	942 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	ARFIP2	P53365	341 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	PSMD4	P55036	377 aa	Known RBP	11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	WNT3	P56703	355 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	FBXW4	P57775	412 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	KCNK10	P57789	538 aa		11.13	□□□□□ -0.63
CSNK1E-213	ENST00000495232	GPR85	P60893	370 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms