RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ZNF75CPQ92670 426 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 OMA1Q96E52 524 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 VSTM2LQ96N03 204 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 SH3GL2Q99962 352 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 DOHHQ9BU89 302 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 TTTY12Q9BZ98 90 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 ACBD3Q9H3P7 528 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 MEAF6Q9HAF1 191 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 IL1RL2Q9HB29 575 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 SH2D2AQ9NP31 389 aa14.66□□□□□ -0.06
LIME1-209ENST00000494776 ACSS1Q9NUB1 689 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 TUBA8Q9NY65 449 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 BOKQ9UMX3 212 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 C19orf53Q9UNZ5 99 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 GPR55Q9Y2T6 319 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 PRRC2CQ9Y520 2896 aaKnown RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 UBR5O95071 2799 aaPredicted RBP14.66□□□□□ -0.06
LIME1-209ENST00000494776 TRGV8A0A0C4DH27 118 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 SLCO1B7G3V0H7 640 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 UPK1AO00322 258 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 HDAC3O15379 428 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 LRRTM2O43300 516 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 SEMA7AO75326 666 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 REM1O75628 298 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 PDE9AO76083 593 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 ABCB1P08183 1280 aaPredicted RBP14.65□□□□□ -0.06
LIME1-209ENST00000494776 ABOP16442 354 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 EFNA1P20827 205 aaPredicted RBP14.65□□□□□ -0.06
LIME1-209ENST00000494776 IL12BP29460 328 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 PRKAG1P54619 331 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 CORO7P57737 925 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.65□□□□□ -0.06
LIME1-209ENST00000494776 TBCELQ5QJ74 424 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 PAOXQ6QHF9 649 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 NUP54Q7Z3B4 507 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 OR2L13Q8N349 312 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 KRTCAP2Q8N6L1 136 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 SPPL2AQ8TCT8 520 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 LRRC8CQ8TDW0 803 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 TMBIM1Q969X1 311 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 BTBD9Q96Q07 612 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 SECISBP2Q96T21 854 aaKnown RBP14.65□□□□□ -0.06
LIME1-209ENST00000494776 DEFB127Q9H1M4 99 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 METTL7AQ9H8H3 244 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 C3orf14Q9HBI5 128 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 ASIC5Q9NY37 505 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 SH3BGRL2Q9UJC5 107 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 CNOT11Q9UKZ1 510 aaKnown RBP14.65□□□□□ -0.06
LIME1-209ENST00000494776 MAPRE3Q9UPY8 281 aa14.65□□□□□ -0.06
LIME1-209ENST00000494776 A0A1B0GUH1 482 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 A0A1W2PRB8 838 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 KLF11O14901 512 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 TO15178 435 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 SLC19A2O60779 497 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 CT45A8P0DMV1 189 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 CT45A9P0DMV2 189 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 LAMP1P11279 417 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 FRKP42685 505 aaPredicted RBP14.64□□□□□ -0.07
LIME1-209ENST00000494776 MASP1P48740 699 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 DIO3P55073 304 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 CLDN8P56748 225 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 PSPHP78330 225 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 HSF1Q00613 529 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 SRSF1Q07955 248 aaKnown RBP eCLIP14.64□□□□□ -0.073e-6■□□□□ 9.6
LIME1-209ENST00000494776 ESPL1Q14674 2120 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 PGS1Q32NB8 556 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 C4orf17Q53FE4 359 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 CT45A2Q5DJT8 189 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 C1QL3Q5VWW1 255 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 TMEM198Q66K66 360 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 PACS2Q86VP3 889 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 WDR75Q8IWA0 830 aaKnown RBP14.64□□□□□ -0.07
LIME1-209ENST00000494776 NATD1Q8N6N6 113 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 OR52N2Q8NGI0 321 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 CEP70Q8NHQ1 597 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 TMCO6Q96DC7 493 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 DPY30Q9C005 99 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 EQTNQ9NQ60 294 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 SNX8Q9Y5X2 465 aa14.64□□□□□ -0.07
LIME1-209ENST00000494776 HECTD1Q9ULT8 2610 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 GOLGA8QA0A0J9YX86 632 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 CLEC18AA5D8T8 446 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 GOLGA8OA6NCC3 632 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 ANKRD33BA6NCL7 494 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 GOLGA8NF8WBI6 632 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 CFLARO15519 480 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 SNX4O95219 450 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 STSP08842 583 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 IFI6P09912 130 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 CASP3P42574 277 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 MAGEA5P43359 124 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 CDK9P50750 372 aaKnown RBP14.63□□□□□ -0.07
LIME1-209ENST00000494776 PER3P56645 1201 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 PPP2R2AP63151 447 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 OCRLQ01968 901 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 LSM12Q3MHD2 195 aaKnown RBP14.63□□□□□ -0.07
LIME1-209ENST00000494776 CMPK2Q5EBM0 449 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 BICRALQ6AI39 1079 aa14.63□□□□□ -0.07
LIME1-209ENST00000494776 NXNQ6DKJ4 435 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms