RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KDM4EB2RXH2 506 aaPredicted RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 M0R296 226 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 AXIN1O15169 862 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 UBXN7O94888 489 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 OR5F1O95221 314 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 RECKO95980 971 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 ADH1BP00325 375 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 AK1P00568 194 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 ALPPP05187 535 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 YES1P07947 543 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 IL7P13232 177 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 CSNK2A2P19784 350 aaPredicted RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 GRK5P34947 590 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 MTNR1AP48039 350 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 TAS2R43P59537 309 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 SF1Q15637 639 aaKnown RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 SNAPC1Q16533 368 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 ZSWIM7Q19AV6 140 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 SYT14P1Q58G82 188 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 ZNF648Q5T619 568 aaPredicted RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 C9orf64Q5T6V5 341 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 NDUFAF5Q5TEU4 345 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 LCN1P1Q5VSP4 162 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 BICRALQ6AI39 1079 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 QSOX2Q6ZRP7 698 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 PEX5LQ8IYB4 626 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 LILRA3Q8N6C8 439 aaPredicted RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 CREB3L4Q8TEY5 395 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 LRR1Q96L50 414 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 LRFN5Q96NI6 719 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 AMDHD1Q96NU7 426 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 DEPDC7Q96QD5 511 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 IL4I1Q96RQ9 567 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 MYADMQ96S97 322 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 CNPPD1Q9BV87 410 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 SMG9Q9H0W8 520 aaKnown RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 OR51I1Q9H343 314 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 FN3KQ9H479 309 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 SLA2Q9H6Q3 261 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 TXNL4BQ9NX01 149 aaKnown RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 MRPS23Q9Y3D9 190 aaKnown RBP10.82□□□□□ -0.68
RFC4-214ENST00000494047 PCDHGB7Q9Y5F8 929 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 SNX11Q9Y5W9 270 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 WNT6Q9Y6F9 365 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 V9GYH0 126 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 NOTCH4Q99466 2003 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 CCDC88CQ9P219 2028 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 ZDBF2Q9HCK1 2354 aa10.82□□□□□ -0.68
RFC4-214ENST00000494047 FABP12A6NFH5 140 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 URADA6NGE7 173 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 SAP18O00422 153 aaKnown RBP10.81□□□□□ -0.68
RFC4-214ENST00000494047 MAN2B1O00754 1011 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 AP3D1O14617 1153 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 SPINT1O43278 529 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 SH3BGRLO75368 114 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 KLHL18O94889 574 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 GBAP04062 536 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 PRKAR1AP10644 381 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 HLA-DMAP28067 261 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 GTF2E2P29084 291 aaKnown RBP10.81□□□□□ -0.68
RFC4-214ENST00000494047 NCBP2P52298 156 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFC4-214ENST00000494047 NUBP1P53384 320 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 TAS2R41P59536 307 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 MRPS15P82914 257 aaKnown RBP10.81□□□□□ -0.68
RFC4-214ENST00000494047 EFNB1P98172 346 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 CDK3Q00526 305 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 GINS1Q14691 196 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 QPRTQ15274 297 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 DECR1Q16698 335 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 HSD17B12Q53GQ0 312 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 TRIQKQ629K1 86 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 PODNL1Q6PEZ8 512 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 FAM131AQ6UXB0 335 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 ADGRF3Q8IZF5 1079 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 KLHL36Q8N4N3 616 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 POGLUT1Q8NBL1 392 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 MORN4Q8NDC4 146 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 C19orf18Q8NEA5 215 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 OR2L5Q8NG80 312 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 OR52I1Q8NGK6 324 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 OR5AR1Q8NGP9 310 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 OR6F1Q8NGZ6 308 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 ENKURQ8TC29 256 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 ACOT11Q8WXI4 607 aaPredicted RBP10.81□□□□□ -0.68
RFC4-214ENST00000494047 FGF13Q92913 245 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 EXOSC8Q96B26 276 aaKnown RBP10.81□□□□□ -0.68
RFC4-214ENST00000494047 ARRDC3Q96B67 414 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 SLC22A18Q96BI1 424 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 OTULINQ96BN8 352 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 ZNF582Q96NG8 517 aaPredicted RBP10.81□□□□□ -0.68
RFC4-214ENST00000494047 PHOX2BQ99453 314 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 PRRX2Q99811 253 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 ARHGDIGQ99819 225 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 TEX101Q9BY14 249 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 SPNS1Q9H2V7 528 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 WDR26Q9H7D7 661 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 C14orf105Q9NVL8 296 aa10.81□□□□□ -0.68
RFC4-214ENST00000494047 MRPL39Q9NYK5 338 aaKnown RBP10.81□□□□□ -0.68
RFC4-214ENST00000494047 TVP23BQ9NYZ1 205 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms