RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 NSL1Q96IY1 281 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 SLC35G5Q96KT7 338 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 MS4A4EQ96PG1 132 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 ARHGAP9Q9BRR9 750 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 SLC39A3Q9BRY0 314 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 ITPAQ9BY32 194 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 TRIM8Q9BZR9 551 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 EFCAB1Q9HAE3 211 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 FOLH1BQ9HBA9 442 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.95■□□□□ 0.14
LIME1-208ENST00000493265 PPIEQ9UNP9 301 aaKnown RBP15.95■□□□□ 0.14
LIME1-208ENST00000493265 NAV2Q8IVL1 2488 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 BOD1L1Q8NFC6 3051 aa15.95■□□□□ 0.14
LIME1-208ENST00000493265 C2orf92A0A1B0GVN3 265 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 ZFAND5O76080 213 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 HMGN2P05204 90 aaKnown RBP15.94■□□□□ 0.14
LIME1-208ENST00000493265 PTPN6P29350 595 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 TRMT5Q32P41 509 aaKnown RBP15.94■□□□□ 0.14
LIME1-208ENST00000493265 LRIF1Q5T3J3 769 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 DLEU7Q6UYE1 221 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 MSRB3Q8IXL7 192 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 SLC9A6Q92581 669 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 WWTR1Q9GZV5 400 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 GID8Q9NWU2 228 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 SLC25A37Q9NYZ2 338 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 VAPAQ9P0L0 249 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 PRODH2Q9UF12 536 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 FAF1Q9UNN5 650 aaPredicted RBP15.94■□□□□ 0.14
LIME1-208ENST00000493265 KCNMB2Q9Y691 235 aa15.94■□□□□ 0.14
LIME1-208ENST00000493265 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 OR6C76A6NM76 312 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 WWP2O00308 870 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 ZCCHC18P0CG32 403 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 CORO7P57737 925 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 EBPQ15125 230 aaKnown RBP15.93■□□□□ 0.14
LIME1-208ENST00000493265 ZNHIT3Q15649 155 aaPredicted RBP15.93■□□□□ 0.14
LIME1-208ENST00000493265 COQ5Q5HYK3 327 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.93■□□□□ 0.14
LIME1-208ENST00000493265 B3GNTL1Q67FW5 361 aaPredicted RBP15.93■□□□□ 0.14
LIME1-208ENST00000493265 TCTN3Q6NUS6 607 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 MFSD12Q6NUT3 480 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 BHLHB9Q6PI77 547 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 RNF130Q86XS8 419 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 GALNT16Q8N428 558 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 ZFP90Q8TF47 636 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 LRRC58Q96CX6 371 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 NEURL3Q96EH8 262 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 GIMAP5Q96F15 307 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 CGREF1Q99674 301 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 LHPPQ9H008 270 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 CDCP1Q9H5V8 836 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 TPT1P8Q9HAU6 139 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 NTMQ9P121 344 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 CFL2Q9Y281 166 aa15.93■□□□□ 0.14
LIME1-208ENST00000493265 CLIC1O00299 241 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 UNC5CO95185 931 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 PSMG1O95456 288 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 KRT75O95678 551 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 IFI6P09912 130 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 FAM87AP0C7U9 286 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 ACP2P11117 423 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 HOXB9P17482 250 aaPredicted RBP15.92■□□□□ 0.14
LIME1-208ENST00000493265 MATN1P21941 496 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 CRATP43155 626 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 PRIM2P49643 509 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 NR0B1P51843 470 aaKnown RBP15.92■□□□□ 0.14
LIME1-208ENST00000493265 MTPNP58546 118 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 AP2B1P63010 937 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 MYBPC3Q14896 1274 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 COX20Q5RI15 118 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 SAXO2Q658L1 398 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 TNFAIP8L2Q6P589 184 aaPredicted RBP15.92■□□□□ 0.14
LIME1-208ENST00000493265 SLC44A2Q8IWA5 706 aaPredicted RBP15.92■□□□□ 0.14
LIME1-208ENST00000493265 OR5D16Q8NGK9 328 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 OR5L2Q8NGL0 311 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 DNAJB8Q8NHS0 232 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 FBXO27Q8NI29 283 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 PHF12Q96QT6 1004 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 THUMPD3Q9BV44 507 aaKnown RBP15.92■□□□□ 0.14
LIME1-208ENST00000493265 ACTRT3Q9BYD9 372 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 EPS8L2Q9H6S3 715 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 GPATCH2Q9NW75 528 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 GPR83Q9NYM4 423 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 SPTA1P02549 2419 aa15.92■□□□□ 0.14
LIME1-208ENST00000493265 B2RBV5 119 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 MAN1A2O60476 641 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 ALOX5P09917 674 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 GABRA3P34903 492 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 RFX3P48380 749 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 SELPLGQ14242 412 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 RUNDC3AQ59EK9 446 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 LINC00696Q6ZRV3 163 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 RPS19BP1Q86WX3 136 aaKnown RBP15.91■□□□□ 0.14
LIME1-208ENST00000493265 PRR22Q8IZ63 422 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 SLC5A8Q8N695 610 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 CDRT4Q8N9R6 151 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 SLC16A11Q8NCK7 471 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 GPR151Q8TDV0 419 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 ADAMTS15Q8TE58 950 aa15.91■□□□□ 0.14
LIME1-208ENST00000493265 APOBEC4Q8WW27 367 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms