RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RRP9O43818 475 aaKnown RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 HNRNPCL1O60812 293 aaKnown RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 COQ9O75208 318 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 BCAS2O75934 225 aaPredicted RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 UNC5CO95185 931 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 KRT75O95678 551 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 NPPAP01160 153 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 ZCCHC18P0CG32 403 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 COX6A1P12074 109 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 SOX8P57073 446 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 PSME3P61289 254 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 ZNF155Q12901 538 aaPredicted RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 PCOLCEQ15113 449 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 INPP5JQ15735 1006 aaPredicted RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 ZSCAN26Q16670 478 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 HACD2Q6Y1H2 254 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 RNF111Q6ZNA4 994 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 C6orf120Q7Z4R8 191 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 MORN4Q8NDC4 146 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 OR7G1Q8NGA0 311 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 FBXO27Q8NI29 283 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 NCLNQ969V3 563 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 CTHRC1Q96CG8 243 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 FBXL20Q96IG2 436 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 HOPXQ9BPY8 73 aaPredicted RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 WDR77Q9BQA1 342 aaPredicted RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 ZNF700Q9H0M5 742 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 TPT1P8Q9HAU6 139 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 SLC25A37Q9NYZ2 338 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 C19orf53Q9UNZ5 99 aaPredicted RBP12.46□□□□□ -0.41
MSH6-208ENST00000493177 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
MSH6-208ENST00000493177 ZNF462Q96JM2 2506 aa12.46□□□□□ -0.42
MSH6-208ENST00000493177 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 CLIC1O00299 241 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 PLOD3O60568 738 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 PRAMEF2O60811 474 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 SORBS2O94875 1100 aaKnown RBP12.45□□□□□ -0.42
MSH6-208ENST00000493177 DDAH2O95865 285 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 CBX7O95931 251 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 IFI6P09912 130 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 PPIBP23284 216 aaKnown RBP12.45□□□□□ -0.42
MSH6-208ENST00000493177 PTPN6P29350 595 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 PRIM2P49643 509 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 RASSF2P50749 326 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 CASP9P55211 416 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 MTPNP58546 118 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 SLC26A5P58743 744 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ARG2P78540 354 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 FUT7Q11130 342 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 LASP1Q14847 261 aaKnown RBP12.45□□□□□ -0.42
MSH6-208ENST00000493177 BTBD16Q32M84 506 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 RUNDC3AQ59EK9 446 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 FHL5Q5TD97 284 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 SAXO2Q658L1 398 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ISLR2Q6UXK2 745 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 MSRB3Q8IXL7 192 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 DEFB107AQ8IZN7 70 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 OR2L13Q8N349 312 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ZNF321PQ8N8H1 164 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 RBM15BQ8NDT2 890 aaKnown RBP12.45□□□□□ -0.42
MSH6-208ENST00000493177 SIMC1Q8NDZ2 872 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 B3GNT7Q8NFL0 401 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 OR1N1Q8NGS0 311 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 FBXO30Q8TB52 745 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ZFP90Q8TF47 636 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 JADE3Q92613 823 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ANKRD27Q96NW4 1050 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 MS4A4EQ96PG1 132 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 SH3GL1Q99961 368 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 YIPF4Q9BSR8 244 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 THUMPD3Q9BV44 507 aaKnown RBP12.45□□□□□ -0.42
MSH6-208ENST00000493177 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 OR10A5Q9H207 317 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 RAD21L1Q9H4I0 556 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ADA2Q9NZK5 511 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 PRODH2Q9UF12 536 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 ZNF639Q9UID6 485 aa12.45□□□□□ -0.42
MSH6-208ENST00000493177 FAF1Q9UNN5 650 aaPredicted RBP12.45□□□□□ -0.42
MSH6-208ENST00000493177 TRBV5-3A0A0A0MS03 114 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 C15orf38-AP3S2A0A0A6YYH1 394 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 FXYD1O00168 92 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 GYG2O15488 501 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 NME6O75414 186 aaPredicted RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 HMGN2P05204 90 aaKnown RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 ICAM2P13598 275 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 HOXB9P17482 250 aaPredicted RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 S1PR1P21453 382 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 MATN1P21941 496 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 SOX18P35713 384 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 CRATP43155 626 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 CD97P48960 835 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 RPS26P62854 115 aaKnown RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 ELOAQ14241 798 aaKnown RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 SELPLGQ14242 412 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 EXT1Q16394 746 aa12.44□□□□□ -0.42
MSH6-208ENST00000493177 PLEKHN1Q494U1 663 aaPredicted RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 PRR30Q53SZ7 412 aaPredicted RBP12.44□□□□□ -0.42
MSH6-208ENST00000493177 CRB2Q5IJ48 1285 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms