RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 TMEM81Q6P7N7 255 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 PAOXQ6QHF9 649 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 SLC34A3Q8N130 599 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 FAM109AQ8N4B1 249 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 SPPL2AQ8TCT8 520 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 SSC4DQ8WTU2 575 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 DIO2Q92813 273 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 OMA1Q96E52 524 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 ELP4Q96EB1 424 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 MAGED4Q96JG8 741 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 SH3GL2Q99962 352 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 TSPAN10Q9H1Z9 355 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 MANSC1Q9H8J5 431 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 ZDHHC11Q9H8X9 412 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 ANKRA2Q9H9E1 313 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 MEAF6Q9HAF1 191 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 FOLH1BQ9HBA9 442 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 DDX18Q9NVP1 670 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 SH3BP4Q9P0V3 963 aa9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 ERRFI1Q9UJM3 462 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 CNOT11Q9UKZ1 510 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 BOKQ9UMX3 212 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 PRRC2CQ9Y520 2896 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-206ENST00000492796 OR6C70A6NIJ9 312 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 TTC36A6NLP5 189 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 HMGB1P1B2RPK0 211 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 SLCO1B7G3V0H7 640 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 G3V3Y1 287 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 UPK1AO00322 258 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 SNX4O95219 450 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 ABCB1P08183 1280 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 CT45A8P0DMV1 189 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 CT45A9P0DMV2 189 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PRPS1L1P21108 318 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 GPC1P35052 558 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 KRT20P35900 424 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PIGAP37287 484 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 CA7P43166 264 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 MANFP55145 182 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 CASP6P55212 293 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 FBXW4P57775 412 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PPIAP62937 165 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 FOXO1Q12778 655 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 HSPB3Q12988 150 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 ZNHIT3Q15649 155 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 TTMPQ5BVD1 217 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 CT45A2Q5DJT8 189 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 CPTPQ5TA50 214 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 NPSR1Q6W5P4 371 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 TMEM64Q6YI46 380 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 Q6ZPB1 254 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 NUP54Q7Z3B4 507 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PRR22Q8IZ63 422 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 OR5M3Q8NGP4 307 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 RELTQ969Z4 430 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 CIDECQ96AQ7 238 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 SLC35A4Q96G79 324 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PPP1R36Q96LQ0 422 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 ZNF597Q96LX8 424 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PRPF18Q99633 342 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 DOHHQ9BU89 302 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 ANGPTL4Q9BY76 406 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 NUF2Q9BZD4 464 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 ZFP64Q9NPA5 681 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PLSCR2Q9NRY7 297 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 PNPOQ9NVS9 261 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 QPCTLQ9NXS2 382 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 TUBA8Q9NY65 449 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 B4GALT7Q9UBV7 327 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 ZNF835Q9Y2P0 537 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 FLNCQ14315 2725 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 EML6Q6ZMW3 1958 aa9.79□□□□□ -0.84
CDC42SE1-206ENST00000492796 TRGV8A0A0C4DH27 118 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 WIPF3A6NGB9 483 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 TRPC5OSA6NMA1 111 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 FAM166BA8MTA8 275 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 HDAC3O15379 428 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 LRRTM2O43300 516 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 TRIM3O75382 744 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 LDLRP01130 860 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 G6PDP11413 515 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 ABOP16442 354 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 LBPP18428 481 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 IL12BP29460 328 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 PNLIPRP2P54317 469 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 CLDN8P56748 225 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 CORO7P57737 925 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 MRPS22P82650 360 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 PSG6Q00889 435 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 OCRLQ01968 901 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 SNTA1Q13424 505 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 EFR3AQ14156 821 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 VPS26BQ4G0F5 336 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 TMEM198Q66K66 360 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 OGFOD2Q6N063 350 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 SLC30A6Q6NXT4 461 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 MTFR2Q6P444 385 aa9.78□□□□□ -0.84
CDC42SE1-206ENST00000492796 ARHGAP11AQ6P4F7 1023 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms