RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 GGTA1PQ4G0N0 100 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 FNDC7Q5VTL7 733 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 FRG2Q64ET8 278 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 TIGD3Q6B0B8 471 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 GOLGA7Q7Z5G4 137 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 CDC20BQ86Y33 519 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 RELL2Q8NC24 303 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-212ENST00000492407 TNIP2Q8NFZ5 429 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 FBXO25Q8TCJ0 367 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 KCTD4Q8WVF5 259 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 JSRP1Q96MG2 331 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-212ENST00000492407 GPR78Q96P69 363 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 FRG2BQ96QU4 278 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 ACBD3Q9H3P7 528 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 NMRK1Q9NWW6 199 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 ITPR3Q14573 2671 aa8.35□□□□□ -1.07
HDAC3-212ENST00000492407 SPG11Q96JI7 2443 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 A0A096LPK6 155 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 C1orf226A1L170 272 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 HMX2A2RU54 273 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 TUBAL3A6NHL2 446 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 GLOD5A6NK44 160 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 CASQ2O14958 399 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PGRMC2O15173 223 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 TO15178 435 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ATP6V1G1O75348 118 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PPM1BO75688 479 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 CBR3O75828 277 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 TRAPPC6AO75865 159 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 RAF1P04049 648 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ABCB1P08183 1280 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 RPS2P15880 293 aaKnown RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 BMP7P18075 431 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 CSNK2A2P19784 350 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 KLK2P20151 261 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 S1PR1P21453 382 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 DRD5P21918 477 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 GPX3P22352 226 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 CHMP24386 653 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ABCD3P28288 659 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PTPN6P29350 595 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 TYK2P29597 1187 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 SSTR4P31391 388 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PHBP35232 272 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 MASP1P48740 699 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 SERPINB8P50452 374 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 FBXW4P57775 412 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 GAB1Q13480 694 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 RCAN2Q14206 197 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 TOMM20Q15388 145 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 CCNYL2Q5T2Q4 361 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 THOC7Q6I9Y2 204 aaKnown RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 SLC48A1Q6P1K1 146 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ZDHHC24Q6UX98 284 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PAMR1Q6UXH9 720 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ZNF572Q7Z3I7 529 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 JAZF1Q86VZ6 243 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 METTL4Q8N3J2 472 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 RNF175Q8N4F7 328 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 NAXEQ8NCW5 288 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ABTB1Q969K4 478 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ATP6V1E2Q96A05 226 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ISL2Q96A47 359 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 WDYHV1Q96HA8 205 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 GNRHR2Q96P88 292 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 TM9SF2Q99805 663 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 GPATCH1Q9BRR8 931 aaKnown RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 SFXN3Q9BWM7 321 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 UGT2B28Q9BY64 529 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 FUT8Q9BYC5 575 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 SHCBP1LQ9BZQ2 653 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PIGMQ9H3S5 423 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 NOL11Q9H8H0 719 aaKnown RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 BRF2Q9HAW0 419 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 DLL4Q9NR61 685 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ARGLU1Q9NWB6 273 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 TEX10Q9NXF1 929 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PRODH2Q9UF12 536 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 ZNF639Q9UID6 485 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 CBLCQ9ULV8 474 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 RNF11Q9Y3C5 154 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 MRPS18CQ9Y3D5 142 aaKnown RBP8.34□□□□□ -1.07
HDAC3-212ENST00000492407 PCDHA9Q9Y5H5 950 aa8.34□□□□□ -1.07
HDAC3-212ENST00000492407 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF407Q9C0G0 2248 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 WASHC1A8K0Z3 465 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 HNRNPCL2B2RXH8 293 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 OR7A17O14581 309 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 SNPHO15079 494 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 POLR3GO15318 223 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 HNRNPCL1O60812 293 aaKnown RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ZNF254O75437 659 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 PRKRAO75569 313 aaKnown RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 RCBTB2O95199 551 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ACSL3O95573 720 aa8.33□□□□□ -1.08
HDAC3-212ENST00000492407 ALDOAP04075 364 aaKnown RBP8.33□□□□□ -1.08
HDAC3-212ENST00000492407 S100A6P06703 90 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms