RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 WBP11Q9Y2W2 641 aaKnown RBP22.63■■□□□ 1.21
UPF3A-209ENST00000492270 ARHGAP21Q5T5U3 1957 aa22.63■■□□□ 1.21
UPF3A-209ENST00000492270 FRG2CA6NGY1 282 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 E9PLN8 166 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 ACOX3O15254 700 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 PLOD3O60568 738 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 SKAP2O75563 359 aaPredicted RBP22.62■■□□□ 1.21
UPF3A-209ENST00000492270 LYPLA1O75608 230 aaPredicted RBP22.62■■□□□ 1.21
UPF3A-209ENST00000492270 BCAS2O75934 225 aaPredicted RBP22.62■■□□□ 1.21
UPF3A-209ENST00000492270 DRD5P21918 477 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 NTSP30990 170 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 SERPINB5P36952 375 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 CASP3P42574 277 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 DCAF7P61962 342 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 SLC10A1Q14973 349 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 ZNF385BQ569K4 471 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 XKR7Q5GH72 579 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 TNFAIP8L3Q5GJ75 292 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 TBCELQ5QJ74 424 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 FNDC7Q5VTL7 733 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 TMEM107Q6UX40 140 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 NUDCD3Q8IVD9 361 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 RPRMLQ8N4K4 120 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 MARVELD2Q8N4S9 558 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 BTBD9Q96Q07 612 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 NODALQ96S42 347 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 SECISBP2Q96T21 854 aaKnown RBP22.62■■□□□ 1.21
UPF3A-209ENST00000492270 VKORC1Q9BQB6 163 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 ANGPTL4Q9BY76 406 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 PNPLA3Q9NST1 481 aa22.62■■□□□ 1.21
UPF3A-209ENST00000492270 A0A1B0GVC2 190 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 PRSS44E7EML9 344 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 TO15178 435 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 AKAP10O43572 662 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 UGT2B11O75310 529 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 ERN1O75460 977 aaKnown RBP22.61■■□□□ 1.21
UPF3A-209ENST00000492270 TUBBP07437 444 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 CT45A8P0DMV1 189 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 CT45A9P0DMV2 189 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 NAGAP17050 411 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 ENDOUP21128 410 aaKnown RBP22.61■■□□□ 1.21
UPF3A-209ENST00000492270 GRNP28799 593 aaKnown RBP22.61■■□□□ 1.21
UPF3A-209ENST00000492270 CACNA1DQ01668 2161 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 MPP2Q14168 576 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 CT45A2Q5DJT8 189 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 TMEM198Q66K66 360 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 SLC34A3Q8N130 599 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 OR5M9Q8NGP3 310 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 TMBIM1Q969X1 311 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 C3orf30Q96M34 536 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 AMDHD1Q96NU7 426 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 SLC6A15Q9H2J7 730 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 LDAHQ9H6V9 325 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 SSU72Q9NP77 194 aaKnown RBP22.61■■□□□ 1.21
UPF3A-209ENST00000492270 SPRR3Q9UBC9 169 aa22.61■■□□□ 1.21
UPF3A-209ENST00000492270 ITM2AO43736 263 aa22.6■■□□□ 1.21
UPF3A-209ENST00000492270 MAN2A2P49641 1150 aa22.6■■□□□ 1.21
UPF3A-209ENST00000492270 PHF10Q8WUB8 498 aaKnown RBP22.6■■□□□ 1.21
UPF3A-209ENST00000492270 CIDECQ96AQ7 238 aaPredicted RBP22.6■■□□□ 1.21
UPF3A-209ENST00000492270 NTNG2Q96CW9 530 aa22.6■■□□□ 1.21
UPF3A-209ENST00000492270 TP63Q9H3D4 680 aaPredicted RBP22.6■■□□□ 1.21
UPF3A-209ENST00000492270 EXO5Q9H790 373 aa22.6■■□□□ 1.21
UPF3A-209ENST00000492270 ZNF395Q9H8N7 513 aaPredicted RBP22.6■■□□□ 1.21
UPF3A-209ENST00000492270 TRGV5A0A0B4J1U4 118 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 C2orf72A6NCS6 295 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 AQP7O14520 342 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 GDF1P27539 372 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 PTGDSP41222 190 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 MASP1P48740 699 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 TRPC1P48995 793 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 SMSP52788 366 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 RPP38P78345 283 aaKnown RBP22.59■■□□□ 1.21
UPF3A-209ENST00000492270 ZNF155Q12901 538 aaPredicted RBP22.59■■□□□ 1.21
UPF3A-209ENST00000492270 ART3Q13508 389 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 CHI3L2Q15782 390 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 GXYLT1Q4G148 440 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 ZNF551Q7Z340 670 aaPredicted RBP22.59■■□□□ 1.21
UPF3A-209ENST00000492270 NUP54Q7Z3B4 507 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 OR4N2Q8NGD1 307 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 PPP1R14CQ8TAE6 165 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 STMN4Q9H169 189 aaPredicted RBP22.59■■□□□ 1.21
UPF3A-209ENST00000492270 REEP4Q9H6H4 257 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 METTL7AQ9H8H3 244 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 GALNT9Q9HCQ5 603 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 TAS2R9Q9NYW1 312 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 B4GALT7Q9UBV7 327 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 C19orf53Q9UNZ5 99 aaPredicted RBP22.59■■□□□ 1.21
UPF3A-209ENST00000492270 TMED5Q9Y3A6 229 aa22.59■■□□□ 1.21
UPF3A-209ENST00000492270 A0A087WV62 115 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 OR14I1A6ND48 311 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 UPK1AO00322 258 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 GNB5O14775 395 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 PDPK1O15530 556 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 SUSD5O60279 629 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 PEX11AO75192 247 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 REM1O75628 298 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 SNX4O95219 450 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 DHRS4L1P0CG22 281 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 BCKDHAP12694 445 aa22.58■■□□□ 1.21
UPF3A-209ENST00000492270 HSPB3Q12988 150 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms