RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 TMEM81Q6P7N7 255 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 ZCCHC23Q6ZST2 131 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 DDIASQ8IXT1 998 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 OR7G2Q8NG99 324 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 OR5M9Q8NGP3 310 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP39-217ENST00000491659 CA5BP1Q8WTZ4 195 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 TWIST2Q8WVJ9 160 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 TMEM41AQ96HV5 264 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 BTBD9Q96Q07 612 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 CCT7Q99832 543 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 OSBPL11Q9BXB4 747 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 SLC6A15Q9H2J7 730 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 ANKRA2Q9H9E1 313 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 FOLH1BQ9HBA9 442 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 ACKR4Q9NPB9 350 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 TAS2R9Q9NYW1 312 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 TAS2R7Q9NYW3 318 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 KLRF1Q9NZS2 232 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 GPR55Q9Y2T6 319 aaPredicted RBP13.83□□□□□ -0.2
USP39-217ENST00000491659 DNAJC15Q9Y5T4 150 aa13.83□□□□□ -0.2
USP39-217ENST00000491659 PCNX1Q96RV3 2341 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 CACNA1CQ13936 2221 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TMEM233B4DJY2 109 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TO15178 435 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 ABCB7O75027 752 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 WDR1O75083 606 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TRAPPC6AO75865 159 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TUBBP07437 444 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 LINC00032P0C843 101 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 ELAVL4P26378 380 aaKnown RBP13.82□□□□□ -0.2
USP39-217ENST00000491659 ACVR2AP27037 513 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 IL12BP29460 328 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 MC3RP41968 323 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 ZNF844Q08AG5 666 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 KIAA0040Q15053 153 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 GALNTL6Q49A17 601 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 ARL13AQ5H913 290 aaPredicted RBP13.82□□□□□ -0.2
USP39-217ENST00000491659 SH2D4BQ5SQS7 431 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 SLC30A6Q6NXT4 461 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TMEM107Q6UX40 140 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 ACAD11Q709F0 780 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 CLYBLQ8N0X4 340 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 MARVELD2Q8N4S9 558 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 OR2T11Q8NH01 316 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 NEIL3Q8TAT5 605 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 AGR3Q8TD06 166 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 ASB5Q8WWX0 329 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 RND1Q92730 232 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 HGDQ93099 445 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TMBIM1Q969X1 311 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TMCO6Q96DC7 493 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 VSTM2LQ96N03 204 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 COL21A1Q96P44 957 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 DDX18Q9NVP1 670 aaKnown RBP13.82□□□□□ -0.2
USP39-217ENST00000491659 SPRR3Q9UBC9 169 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TNFRSF10DQ9UBN6 386 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 RAB21Q9UL25 225 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 C15orf41Q9Y2V0 281 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TMED5Q9Y3A6 229 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 TRAF6Q9Y4K3 522 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 HRH3Q9Y5N1 445 aa13.82□□□□□ -0.2
USP39-217ENST00000491659 A0A087WV62 115 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 PRAMEF25A6NGN4 478 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 OR6C70A6NIJ9 312 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 GNB5O14775 395 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 PDPK1O15530 556 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 CTIFO43310 598 aaKnown RBP13.81□□□□□ -0.2
USP39-217ENST00000491659 TYROBPO43914 113 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 UGT2B11O75310 529 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 REM1O75628 298 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 BPGMP07738 259 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 FGF4P08620 206 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 COX6B1P14854 86 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 CREB1P16220 341 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 SDC1P18827 310 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 ENDOUP21128 410 aaKnown RBP13.81□□□□□ -0.2
USP39-217ENST00000491659 TACR1P25103 407 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 TRPC1P48995 793 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 CORO7P57737 925 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 SNTA1Q13424 505 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 EFR3AQ14156 821 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 TOMM20Q15388 145 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 ANGPTL8Q6UXH0 198 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 B3GNT6Q6ZMB0 384 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 Q6ZSR9 355 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 RPRMLQ8N4K4 120 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 OR1J4Q8NGS1 313 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 PPP1R14CQ8TAE6 165 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 GFM2Q969S9 779 aaKnown RBP13.81□□□□□ -0.2
USP39-217ENST00000491659 SLC35A4Q96G79 324 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 FCRL1Q96LA6 429 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 AMDHD1Q96NU7 426 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 NODALQ96S42 347 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 TUBB1Q9H4B7 451 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 GLIPR2Q9H4G4 154 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 OR10H1Q9Y4A9 318 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 ARHGAP21Q5T5U3 1957 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 FREM3P0C091 2139 aa13.81□□□□□ -0.2
USP39-217ENST00000491659 C15orf38-AP3S2A0A0A6YYH1 394 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms