RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FEVQ99581 238 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 NDUFAF4Q9P032 175 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP21.39■■□□□ 1.01
USF3-203ENST00000491165 ZNF451Q9Y4E5 1061 aa21.39■■□□□ 1.01
USF3-203ENST00000491165 GCM2O75603 506 aaPredicted RBP21.38■■□□□ 1.01
USF3-203ENST00000491165 GP1BAP07359 652 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 TIA1P31483 386 aaKnown RBP eCLIP21.38■■□□□ 1.01
USF3-203ENST00000491165 UGT2B10P36537 528 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 LIPAP38571 399 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 CLDN6P56747 220 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 RPS13P62277 151 aaKnown RBP21.38■■□□□ 1.01
USF3-203ENST00000491165 DNASE1L3Q13609 305 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 SYT16Q17RD7 645 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 KIF26BQ2KJY2 2108 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 MLIPQ5VWP3 458 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 ANGPTL8Q6UXH0 198 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 TSEN54Q7Z6J9 526 aaKnown RBP21.38■■□□□ 1.01
USF3-203ENST00000491165 RHOXF1Q8NHV9 184 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 DACH2Q96NX9 599 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 CELSR3Q9NYQ7 3312 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 CNOT1A5YKK6 2376 aaKnown RBP21.38■■□□□ 1.01
USF3-203ENST00000491165 IGHV5-10-1A0A0J9YXX1 117 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 AIREO43918 545 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 PCDH7O60245 1069 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 TGFB1P01137 390 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 CXCR2P25025 360 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 CRATP43155 626 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 PPP5CP53041 499 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 AGAP7PQ5VUJ5 663 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 HIST2H2AA3Q6FI13 130 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 RNF44Q7L0R7 432 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 DNAJC22Q8N4W6 341 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 OR10G2Q8NGC3 310 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 CREB3L4Q8TEY5 395 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 CD180Q99467 661 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 RHBGQ9H310 441 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 ZBTB20Q9HC78 741 aaPredicted RBP21.38■■□□□ 1.01
USF3-203ENST00000491165 DMRT3Q9NQL9 472 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 SEMA5BQ9P283 1151 aa21.38■■□□□ 1.01
USF3-203ENST00000491165 D6RAR5 112 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 PTX3P26022 381 aaPredicted RBP21.37■■□□□ 1.01
USF3-203ENST00000491165 C21orf33P30042 268 aaPredicted RBP21.37■■□□□ 1.01
USF3-203ENST00000491165 EIF2B2P49770 351 aaKnown RBP21.37■■□□□ 1.01
USF3-203ENST00000491165 HYAL2Q12891 473 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 CADM3Q8N126 398 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 SLC5A8Q8N695 610 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 DEFB124Q8NES8 71 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 PROX1Q92786 737 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 GFM1Q96RP9 751 aaKnown RBP21.37■■□□□ 1.01
USF3-203ENST00000491165 ZFYVE21Q9BQ24 234 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 BHLHE41Q9C0J9 482 aaPredicted RBP21.37■■□□□ 1.01
USF3-203ENST00000491165 SCN3AQ9NY46 2000 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 P2RX6O15547 441 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 CDK1P06493 297 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 CD40LGP29965 261 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 GABRA4P48169 554 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 TIGD6Q17RP2 521 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 ZNF404Q494X3 552 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 IFI44LQ53G44 452 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 SLITRK4Q8IW52 837 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 OR4D9Q8NGE8 314 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 MMP27Q9H306 513 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 OR51B5Q9H339 312 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 NT5DC2Q9H857 520 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 ANKMY1Q9P2S6 941 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 POFUT2Q9Y2G5 429 aa21.37■■□□□ 1.01
USF3-203ENST00000491165 CLCA1A8K7I4 914 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 M0R082 166 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 SAP18O00422 153 aaKnown RBP21.36■■□□□ 1.01
USF3-203ENST00000491165 OPN1SWP03999 348 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 ANXA8P13928 327 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 CD300CQ08708 224 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 PRSS42Q7Z5A4 293 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 MFSD9Q8NBP5 474 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 FKBP14Q9NWM8 211 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 SOHLH2Q9NX45 425 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 ATP6V1HQ9UI12 483 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 TSC22D4Q9Y3Q8 395 aa21.36■■□□□ 1.01
USF3-203ENST00000491165 ANKDD1BA6NHY2 528 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 C4orf51C9J302 202 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 CNOT3O75175 753 aaKnown RBP21.35■■□□□ 1.01
USF3-203ENST00000491165 SERPIND1P05546 499 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 ETFAP13804 333 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 MVDP53602 400 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 RPS15AP62244 130 aaKnown RBP21.35■■□□□ 1.01
USF3-203ENST00000491165 SPIBQ01892 262 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 TRIP6Q15654 476 aaKnown RBP21.35■■□□□ 1.01
USF3-203ENST00000491165 ZNF385BQ569K4 471 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 COX20Q5RI15 118 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 GCNT6Q5T4J0 391 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 OR4C15Q8NGM1 316 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 GOT1L1Q8NHS2 421 aaPredicted RBP21.35■■□□□ 1.01
USF3-203ENST00000491165 PSMA8Q8TAA3 256 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 GGHQ92820 318 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 REPS1Q96D71 796 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 CCDC74BQ96LY2 380 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 PITHD1Q9GZP4 211 aaPredicted RBP21.35■■□□□ 1.01
USF3-203ENST00000491165 REEP4Q9H6H4 257 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 STARD5Q9NSY2 213 aa21.35■■□□□ 1.01
USF3-203ENST00000491165 EXO1Q9UQ84 846 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms