RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 ABHD13Q7L211 337 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 TICAM1Q8IUC6 712 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 CLECL1Q8IZS7 167 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 FAM169BQ8N8A8 192 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 TTC29Q8NA56 475 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 FAM47BQ8NA70 645 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 WDR60Q8WVS4 1066 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 WFDC12Q8WWY7 111 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 UCN3Q969E3 161 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 CIDECQ96AQ7 238 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 MIEF2Q96C03 454 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 PPCDCQ96CD2 204 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SNRNP40Q96DI7 357 aaKnown RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF764Q96H86 408 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 CCDC115Q96NT0 180 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 PRPF18Q99633 342 aaKnown RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 MAPKAP1Q9BPZ7 522 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 TRIM8Q9BZR9 551 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ROGDIQ9GZN7 287 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 DENND2DQ9H6A0 471 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 RMND5AQ9H871 391 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 COPS7BQ9H9Q2 264 aaPredicted RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 NANOGQ9H9S0 305 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SPAG4Q9NPE6 437 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SLC6A13Q9NSD5 602 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ASF1BQ9NVP2 202 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 LYARQ9NX58 379 aaKnown RBP7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SLC25A37Q9NYZ2 338 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 VAPAQ9P0L0 249 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SH3BP4Q9P0V3 963 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 CD300AQ9UGN4 299 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 BTNL2Q9UIR0 455 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ERVK-11Q9UQG0 969 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 ATG4BQ9Y4P1 393 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 SLC22A7Q9Y694 548 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 MAU2Q9Y6X3 613 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 DOPEY2Q9Y3R5 2298 aa7.07□□□□□ -1.28
CLDN1-202ENST00000490800 UTP20O75691 2785 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 C15orf38-AP3S2A0A0A6YYH1 394 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 FITM1A5D6W6 292 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 PRORSD1PA6NEY8 169 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 VSTM2BA6NLU5 285 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 RNASET2O00584 256 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 SOCS6O14544 535 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 PGRMC2O15173 223 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 PROM1O43490 865 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 B3GALT2O43825 422 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 GALR3O60755 368 aaPredicted RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 DNAJA2O60884 412 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 DNAJB6O75190 326 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 GUCY1B2O75343 617 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 PRKRAO75569 313 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 CPSF4O95639 269 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 AIFM1O95831 613 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ALPPP05187 535 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 GSNP06396 782 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 IL1RNP18510 177 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ME2P23368 584 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 MMP11P24347 488 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ITGA3P26006 1051 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 GIPRP48546 466 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ALDH9A1P49189 494 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 AIMP2Q13155 320 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 KPNB1Q14974 876 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 HEPACAMQ14CZ8 416 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 DEFB134Q4QY38 66 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 RUNDC3AQ59EK9 446 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 RABL3Q5HYI8 236 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 SAMD4BQ5PRF9 694 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 NDUFAF5Q5TEU4 345 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 C18orf63Q68DL7 685 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 HIST2H2BCQ6DN03 193 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 KIRREL2Q6UWL6 708 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 IGFL3Q6UXB1 125 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 PRSS41Q7RTY9 318 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 NET1Q7Z628 596 aaPredicted RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ARPINQ7Z6K5 226 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 PDSS2Q86YH6 399 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ZADH2Q8N4Q0 377 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 RNF148Q8N7C7 305 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 OR8J3Q8NGG0 315 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 DNAJB8Q8NHS0 232 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 DNAJB14Q8TBM8 379 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 FKBP10Q96AY3 582 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 NACC2Q96BF6 587 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 CCDC124Q96CT7 223 aaKnown RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 C10orf90Q96M02 699 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ANKRD27Q96NW4 1050 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 SERINC2Q96SA4 455 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 CPPED1Q9BRF8 314 aaPredicted RBP7.06□□□□□ -1.28
CLDN1-202ENST00000490800 MESP1Q9BRJ9 268 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 FAIM2Q9BWQ8 316 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 SLC26A1Q9H2B4 701 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 IKZF5Q9H5V7 419 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 WDR54Q9H977 334 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ZNF304Q9HCX3 659 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 MIEF1Q9NQG6 463 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 ATAD3AQ9NVI7 634 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 TAS2R7Q9NYW3 318 aa7.06□□□□□ -1.28
CLDN1-202ENST00000490800 KCMF1Q9P0J7 381 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms