RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SEMA6DQ8NFY4 1073 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 CALML6Q8TD86 181 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 C3orf49Q96BT1 292 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 OMA1Q96E52 524 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 FRMD8P1Q9BZ68 369 aaPredicted RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 PITHD1Q9GZP4 211 aaPredicted RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 CXorf21Q9HAI6 301 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 FOLH1BQ9HBA9 442 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 FAIMQ9NVQ4 179 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 MRPS18CQ9Y3D5 142 aaKnown RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 PLCE1Q9P212 2302 aa12.21□□□□□ -0.46
EXOSC3-207ENST00000490516 PRKDCP78527 4128 aaKnown RBP12.21□□□□□ -0.46
EXOSC3-207ENST00000490516 NPEPPSL1A6NEC2 478 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 C17orf51A8MQB3 221 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 SHISA9B4DS77 424 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 LY6HO94772 140 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 TPM3P06753 285 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 PYGBP11216 843 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 NAGAP17050 411 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 SRP14P37108 136 aaKnown RBP12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 CDH11P55287 796 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 CTBP2P56545 445 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 CLDN20P56880 219 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 EEFSECP57772 596 aaKnown RBP12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 CDK16Q00536 496 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 IRF9Q00978 393 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 SPA17Q15506 151 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 AGAP6Q5VW22 663 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 PPP4R4Q6NUP7 873 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 SEZ6L2Q6UXD5 910 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 PLD6Q8N2A8 252 aaKnown RBP12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 C17orf47Q8NEP4 570 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 STEAP2Q8NFT2 490 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 ZFAND2BQ8WV99 257 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 ANKRD7Q92527 254 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 GCDHQ92947 438 aaPredicted RBP12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 SERPINB12Q96P63 405 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 OCEL1Q9H607 264 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 FANCFQ9NPI8 374 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 MS4A12Q9NXJ0 267 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 ZNF337Q9Y3M9 751 aa12.2□□□□□ -0.46
EXOSC3-207ENST00000490516 TMEM89A2RUT3 159 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 GOLGA6L19H0YKK7 550 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 CLGNO14967 610 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 PLGP00747 810 aaPredicted RBP12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 TGFB1P01137 390 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 SLC35E2BP0CK96 405 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 SLC35E2P0CK97 266 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 APEHP13798 732 aaKnown RBP12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 ADH6P28332 368 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 TLX1P31314 330 aaPredicted RBP12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 GALNSP34059 522 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 PLCXD2Q0VAA5 305 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 OR4C11Q6IEV9 310 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 FIGNL1Q6PIW4 674 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 VSTM4Q8IW00 320 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 GALNT12Q8IXK2 581 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 C2CD4AQ8NCU7 369 aaPredicted RBP12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 OR5M1Q8NGP8 315 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 PIWIL2Q8TC59 973 aaKnown RBP12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 ZNF473Q8WTR7 871 aaKnown RBP12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 CALR3Q96L12 384 aaKnown RBP12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 SOX7Q9BT81 388 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 FAM167BQ9BTA0 163 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 C12orf49Q9H741 205 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 PRM3Q9NNZ6 103 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 PHF11Q9UIL8 331 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 VWFP04275 2813 aa12.19□□□□□ -0.46
EXOSC3-207ENST00000490516 SDR42E2A6NKP2 422 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 MIF4GDA9UHW6 222 aaKnown RBP12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 VWC2LB2RUY7 222 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 H3BML4 177 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 TMPRSS2O15393 492 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 FCGR2AP12318 317 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 IL11P20809 199 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 TMEM35AQ53FP2 167 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 FBXO48Q5FWF7 155 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 RAET1LQ5VY80 246 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 ANKRD22Q5VYY1 191 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 ARMC3Q5W041 872 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 C4orf22Q6V702 233 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 AGGF1Q8N302 714 aaeCLIP12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 KAT2AQ92830 837 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 PTCD3Q96EY7 689 aaKnown RBP12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 GMPPAQ96IJ6 420 aaPredicted RBP12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 ITPAQ9BY32 194 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 LACRTQ9GZZ8 138 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 STMN4Q9H169 189 aaPredicted RBP12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 OR51B5Q9H339 312 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 EHD1Q9H4M9 534 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 ZNF696Q9H7X3 374 aa12.18□□□□□ -0.46
EXOSC3-207ENST00000490516 A0A1W2PR48 441 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 MAGEB16A2A368 324 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 NCF1BA6NI72 391 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 NCF1CA8MVU1 366 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 AKR1B15C9JRZ8 316 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 SS18L1O75177 396 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms