RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 MED13Q9UHV7 2174 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 RNF103-CHMP3A0A140T963 221 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 VSTM2BA6NLU5 285 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 PROM1O43490 865 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 SERPINA1P01009 418 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 MMP11P24347 488 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 NTSP30990 170 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 PCGF2P35227 344 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 CRATP43155 626 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 MVDP53602 400 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 ATP6AP1Q15904 470 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 FAM180BQ6P0A1 224 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 ENPP6Q6UWR7 440 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 C11orf65Q8NCR3 313 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 OR5AK3PQ8NH89 298 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 UCN3Q969E3 161 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 SLC47A1Q96FL8 570 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 CENPNQ96H22 339 aaPredicted RBP14.63□□□□□ -0.07
PCCB-218ENST00000490504 CHID1Q9BWS9 393 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 EPS8L2Q9H6S3 715 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 MAGIXQ9H6Y5 334 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 ZNF304Q9HCX3 659 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 PHF11Q9UIL8 331 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 PCDHGB7Q9Y5F8 929 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 SNX8Q9Y5X2 465 aa14.63□□□□□ -0.07
PCCB-218ENST00000490504 RELNP78509 3460 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 SOCS6O14544 535 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 B3GALT2O43825 422 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 LDLRP01130 860 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 ETFAP13804 333 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 HSPB3Q12988 150 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 COX20Q5RI15 118 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 GCNT6Q5T4J0 391 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 GALNT16Q8N428 558 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 CLEC1AQ8NC01 280 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 ZFP28Q8NHY6 868 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 PSMA8Q8TAA3 256 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 MIB2Q96AX9 1013 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 NEURL3Q96EH8 262 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 BTBD9Q96Q07 612 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 BBS4Q96RK4 519 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 SMAD5Q99717 465 aaKnown RBP14.62□□□□□ -0.07
PCCB-218ENST00000490504 MAPKAP1Q9BPZ7 522 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 MESP1Q9BRJ9 268 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 MFRPQ9BY79 579 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 GPATCH2Q9NW75 528 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 CES1P1Q9UKY3 287 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 FAF1Q9UNN5 650 aaPredicted RBP14.62□□□□□ -0.07
PCCB-218ENST00000490504 SAMD4AQ9UPU9 718 aaKnown RBP14.62□□□□□ -0.07
PCCB-218ENST00000490504 ENTPD4Q9Y227 616 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 NBASA2RRP1 2371 aa14.62□□□□□ -0.07
PCCB-218ENST00000490504 PGRMC2O15173 223 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 ALOX12BO75342 701 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 TNFRSF21O75509 655 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 PRKRAO75569 313 aaKnown RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 PRKD3O94806 890 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 IGHEP01854 428 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 NUDT7P0C024 238 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 NR2F6P10588 404 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 ALOX12P18054 663 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 BUD31P41223 144 aaPredicted RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 EMP3P54852 163 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 SNRPNP63162 240 aaKnown RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 RBBP4Q09028 425 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 SWT1Q5T5J6 900 aaKnown RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 SAXO2Q658L1 398 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 C18orf63Q68DL7 685 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 TMEM214Q6NUQ4 689 aaKnown RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 SLC48A1Q6P1K1 146 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 KIRREL2Q6UWL6 708 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 RNF130Q86XS8 419 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 PRSS58Q8IYP2 241 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 ARHGEF39Q8N4T4 335 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 FAM86B1Q8N7N1 296 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 RBMXL3Q8N7X1 1067 aaKnown RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 STT3BQ8TCJ2 826 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 NACC2Q96BF6 587 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 AMDHD1Q96NU7 426 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 GLIPR2Q9H4G4 154 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 ZNF552Q9H707 407 aaPredicted RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 SIRT3Q9NTG7 399 aaPredicted RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 GIMAP4Q9NUV9 329 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 RPS6KA6Q9UK32 745 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 FBXL4Q9UKA2 621 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 NXT1Q9UKK6 140 aaKnown RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 MAP4K5Q9Y4K4 846 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 HS3ST3B1Q9Y662 390 aa14.61□□□□□ -0.07
PCCB-218ENST00000490504 SETXQ7Z333 2677 aaKnown RBP14.61□□□□□ -0.07
PCCB-218ENST00000490504 GLOD5A6NK44 160 aa14.6□□□□□ -0.07
PCCB-218ENST00000490504 TTLL8A6PVC2 850 aa14.6□□□□□ -0.07
PCCB-218ENST00000490504 MYO1GB0I1T2 1018 aa14.6□□□□□ -0.07
PCCB-218ENST00000490504 H0YJX3 145 aa14.6□□□□□ -0.07
PCCB-218ENST00000490504 DPM1O60762 260 aa14.6□□□□□ -0.07
PCCB-218ENST00000490504 DEAF1O75398 565 aaPredicted RBP14.6□□□□□ -0.07
PCCB-218ENST00000490504 ERAL1O75616 437 aaKnown RBP14.6□□□□□ -0.07
PCCB-218ENST00000490504 RPSAP08865 295 aaKnown RBP14.6□□□□□ -0.07
PCCB-218ENST00000490504 KDELR2P33947 212 aa14.6□□□□□ -0.07
PCCB-218ENST00000490504 HSPA13P48723 471 aa14.6□□□□□ -0.07
PCCB-218ENST00000490504 CDK9P50750 372 aaKnown RBP14.6□□□□□ -0.07
PCCB-218ENST00000490504 NCBP2P52298 156 aaKnown RBP eCLIP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms