RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 PSMD12O00232 456 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 CLDN4O14493 209 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TFECO14948 347 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TAPBPO15533 448 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 ZNF354AO60765 605 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 CTNSO60931 367 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 OR2J2O76002 312 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 ZFAND5O76080 213 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 OR6B1O95007 311 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TUBB4AP04350 444 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TPOP07202 933 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 GNAZP19086 355 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 CNR1P21554 472 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 CHRNB4P30926 498 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 SSR4P51571 173 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 LIM2P55344 173 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 RAB38P57729 211 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TAS2R39P59534 338 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 PMPCAQ10713 525 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 FOXO1Q12778 655 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 MORF4L2Q15014 288 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 C18orf21Q32NC0 220 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 SPDYE7PQ495Y7 208 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 GXYLT1Q4G148 440 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 CDKL4Q5MAI5 379 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 Q6YL49 198 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 C16orf47Q6ZP98 133 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 RGS9BPQ6ZS82 235 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TMPRSS11BQ86T26 416 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TMEM156Q8N614 296 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 PSD4Q8NDX1 1056 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 BEND2Q8NDZ0 799 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 OR2L5Q8NG80 312 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 OR2M7Q8NG81 312 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 OR8K3Q8NH51 312 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 RND1Q92730 232 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 WDR34Q96EX3 536 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 CAPS2Q9BXY5 557 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 KRTAP17-1Q9BYP8 105 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 RHBGQ9H310 441 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 TP63Q9H3D4 680 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 EHD1Q9H4M9 534 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 LIN28AQ9H9Z2 209 aaKnown RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 POPDC3Q9HBV1 291 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 SH2D2AQ9NP31 389 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 ADAP2Q9NPF8 381 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 PRTFDC1Q9NRG1 225 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 PNO1Q9NRX1 252 aaKnown RBP5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 FBXW2Q9UKT8 454 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 SNX12Q9UMY4 172 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 DAPP1Q9UN19 280 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 NOX1Q9Y5S8 564 aa5.87□□□□□ -1.47
PRPF40A-210ENST00000489741 ANKHD1Q8IWZ3 2542 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 AKAP6Q13023 2319 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 MED13LQ71F56 2210 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 A0A0G2JMM0 328 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 A0A0G2JN53 185 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 A0A1W2PPB8 328 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 A0A1W2PRS3 328 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 NKX2-6A6NCS4 301 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 MARCH11A6NNE9 402 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 USP27XA6NNY8 438 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 A8MVJ9 347 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 KIR3DP1A8MWS1 328 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 FOXO6A8MYZ6 492 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 ERI3O43414 337 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 CDC40O60508 579 aaKnown RBP eCLIP5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 KRT38O76015 456 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 PDE9AO76083 593 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 SCELO95171 688 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 EPORP19235 508 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 CD22P20273 847 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 DDCP20711 480 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 CASP2P42575 452 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 DLX5P56178 289 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 NUP107P57740 925 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 PPIAP62937 165 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 IGLV3-21P80748 117 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 TP53BP2Q13625 1128 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 EFTUD2Q15029 972 aaKnown RBP eCLIP5.86□□□□□ -1.471e-9■■■□□ 16.9
PRPF40A-210ENST00000489741 PPP1R7Q15435 360 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 TGFBIQ15582 683 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 TSNQ15631 228 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 ZNF750Q32MQ0 723 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 PIGGQ5H8A4 983 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 NDUFAF5Q5TEU4 345 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 RTL6Q6ICC9 239 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 IL20RBQ6UXL0 311 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 HSDL2Q6YN16 418 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 SEM1Q6ZVN7 128 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 CYS1Q717R9 158 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 TRILQ7L0X0 811 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 ADAMTSL2Q86TH1 951 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 CCDC71Q8IV32 467 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 PDIK1LQ8N165 341 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 KRT78Q8N1N4 520 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 SLC35F6Q8N357 371 aa5.86□□□□□ -1.47
PRPF40A-210ENST00000489741 TMEM132CQ8N3T6 1108 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms