RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CES3Q6UWW8 571 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 VASH1Q7L8A9 365 aaPredicted RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 C1QL2Q7Z5L3 287 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 ATG4DQ86TL0 474 aaPredicted RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 KLHDC8BQ8IXV7 354 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SIGLECL1Q8N7X8 197 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 CNTD1Q8N815 330 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 CNEP1R1Q8N9A8 125 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SPATA22Q8NHS9 363 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 TMEM186Q96B77 213 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SGCZQ96LD1 299 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 POLR1EQ9GZS1 481 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SAP130Q9H0E3 1048 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 FAM96AQ9H5X1 160 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SYNPO2LQ9H987 977 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 UGT1A10Q9HAW8 530 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 PLAC1Q9HBJ0 212 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 NPHS2Q9NP85 383 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 CHRAC1Q9NRG0 131 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 IARS2Q9NSE4 1012 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 DNAJC11Q9NVH1 559 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 RPUSD1Q9UJJ7 312 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 ZNF223Q9UK11 482 aaPredicted RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 FBXW2Q9UKT8 454 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 BOKQ9UMX3 212 aaPredicted RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 MTO1Q9Y2Z2 717 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC6A5Q9Y345 797 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 TCAF1Q9Y4C2 921 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SHISA9B4DS77 424 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 H0YGG7 62 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 H0YIG0 161 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 HNRNPCL1O60812 293 aaKnown RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 DNAJC8O75937 253 aaPredicted RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 BPGMP07738 259 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 FAM157BP0CG42 384 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 CD8BP10966 210 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 BGNP21810 368 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 CES1P23141 567 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 GRK2P25098 689 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 NMBRP28336 390 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 PKLRP30613 574 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 TTKP33981 857 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 PIGAP37287 484 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 SKIV2L2P42285 1042 aaKnown RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 ETV4P43268 484 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 KIR2DL2P43627 348 aaPredicted RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 CLCN2P51788 898 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 WNT3AP56704 352 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 ARF3P61204 181 aaPredicted RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 STX3Q13277 289 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 CHI3L2Q15782 390 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 TEDDM1Q5T9Z0 273 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 RAPH1Q70E73 1250 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 DOK3Q7L591 496 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 KRT77Q7Z794 578 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 LMNTD2Q8IXW0 634 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 TBC1D21Q8IYX1 336 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 CSNK1A1LQ8N752 337 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 DTX3LQ8TDB6 740 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC25A28Q96A46 364 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 PHF21AQ96BD5 680 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC22A18Q96BI1 424 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 TADA1Q96BN2 335 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 ZNF837Q96EG3 531 aaPredicted RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 MFSD3Q96ES6 412 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 TSPAN17Q96FV3 270 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 IMP4Q96G21 291 aaKnown RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 C7orf26Q96N11 449 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 RAB3IPQ96QF0 476 aaPredicted RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 RASL10BQ96S79 203 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 GORASP1Q9BQQ3 440 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 SIKE1Q9BRV8 207 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 TACO1Q9BSH4 297 aaKnown RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 ACTR6Q9GZN1 396 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 RHOJQ9H4E5 214 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 BEX1Q9HBH7 125 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 SLCO1B3Q9NPD5 702 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 IL26Q9NPH9 171 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 SNX15Q9NRS6 342 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 LANCL2Q9NS86 450 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 ABCF3Q9NUQ8 709 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 POLG2Q9UHN1 485 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 ZDHHC2Q9UIJ5 367 aa6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 TDRKHQ9Y2W6 561 aaKnown RBP6.66□□□□□ -1.34
EXOSC3-206ENST00000489414 A0A0G2JND7 137 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 ZCWPW2A0A1B0GU75 182 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 CLDN34H7C241 214 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 PFDN6O15212 129 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 PRKNO60260 465 aaPredicted RBP6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 PLIN3O60664 434 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 RAMP1O60894 148 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 CDC123O75794 336 aaPredicted RBP6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 UBOX5O94941 541 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 FKBP9O95302 570 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 ALDOAP04075 364 aaKnown RBP6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 CSF1P09603 554 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 STMN1P16949 149 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 UGT1A6P19224 532 aa6.65□□□□□ -1.34
EXOSC3-206ENST00000489414 MSH3P20585 1137 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms