RNA–Protein interactions for RNA: ENST00000489274.1

NINJ1-204, Transcript of ninjurin 1, humanhuman

TSL 2

Gene NINJ1, Length 2,026 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-204ENST00000489274 COG8Q96MW5 612 aa13.64□□□□□ -0.23
NINJ1-204ENST00000489274 SIGLEC11Q96RL6 698 aa13.64□□□□□ -0.23
NINJ1-204ENST00000489274 UCK2Q9BZX2 261 aa13.64□□□□□ -0.23
NINJ1-204ENST00000489274 CCDC90BQ9GZT6 254 aa13.64□□□□□ -0.23
NINJ1-204ENST00000489274 TRIM45Q9H8W5 580 aaPredicted RBP13.64□□□□□ -0.23
NINJ1-204ENST00000489274 MTHFD2LQ9H903 347 aaPredicted RBP13.64□□□□□ -0.23
NINJ1-204ENST00000489274 ANKHQ9HCJ1 492 aa13.64□□□□□ -0.23
NINJ1-204ENST00000489274 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
NINJ1-204ENST00000489274 ZAR1LA6NP61 321 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 ZNF99A8MXY4 864 aaPredicted RBP13.63□□□□□ -0.23
NINJ1-204ENST00000489274 LMO7DNF2Z398 122 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 OSMP13725 252 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 CHMP24386 653 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 MAPK10P53779 464 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 HNRNPKP61978 463 aaKnown RBP eCLIP13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SHC2P98077 582 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 MVKQ03426 396 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 ILKQ13418 452 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SLC36A4Q6YBV0 504 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SIX5Q8N196 739 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SVOPQ8N4V2 548 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SLC7A13Q8TCU3 470 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SLC38A3Q99624 504 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 FNDC11Q9BVV2 318 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 PIGUQ9H490 435 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 LIN28AQ9H9Z2 209 aaKnown RBP13.63□□□□□ -0.23
NINJ1-204ENST00000489274 STARD5Q9NSY2 213 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 ZNF226Q9NYT6 803 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 REV1Q9UBZ9 1251 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SCN3AQ9NY46 2000 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SGK494L7N484 410 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 AQP9O43315 295 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 OR10H3O60404 316 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 MPZL2O60487 215 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 LDB3O75112 727 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 ACVR2AP27037 513 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 TRMT12Q53H54 448 aaKnown RBP13.63□□□□□ -0.23
NINJ1-204ENST00000489274 NIPAL1Q6NVV3 410 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 PGBD2Q6P3X8 592 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 CD300LDQ6UXZ3 194 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 ANKRD9Q96BM1 317 aaPredicted RBP13.63□□□□□ -0.23
NINJ1-204ENST00000489274 ZG16BQ96DA0 208 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 ZNF285Q96NJ3 590 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 CDX2Q99626 313 aaPredicted RBP13.63□□□□□ -0.23
NINJ1-204ENST00000489274 MIR1-1HGQ9H1L0 117 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 PSORS1C1Q9UIG5 152 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 IFT52Q9Y366 437 aa13.63□□□□□ -0.23
NINJ1-204ENST00000489274 FAM227AF5H4B4 570 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 NOL3O60936 208 aaKnown RBP13.62□□□□□ -0.23
NINJ1-204ENST00000489274 ATE1O95260 518 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 ZIC2O95409 532 aaPredicted RBP13.62□□□□□ -0.23
NINJ1-204ENST00000489274 ACP2P11117 423 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 IDH2P48735 452 aaKnown RBP13.62□□□□□ -0.23
NINJ1-204ENST00000489274 PDX1P52945 283 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 UGT2B15P54855 530 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 CDC42P60953 191 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 HPCAP84074 193 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 ID2Q02363 134 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 MGAT2Q10469 447 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 COX10Q12887 443 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 PRICKLE4Q2TBC4 344 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 PODNL1Q6PEZ8 512 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 FRRS1Q6ZNA5 592 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 OR52P1PQ8NH57 321 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 RAB2BQ8WUD1 216 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 RORBQ92753 470 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 CDS1Q92903 461 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 CTHRC1Q96CG8 243 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 SPACA7Q96KW9 195 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 HSPA12BQ96MM6 686 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 MAP3K3Q99759 626 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 NAA50Q9GZZ1 169 aaKnown RBP13.62□□□□□ -0.23
NINJ1-204ENST00000489274 CHRNA10Q9GZZ6 450 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 QRSL1Q9H0R6 528 aaKnown RBP13.62□□□□□ -0.23
NINJ1-204ENST00000489274 TIMMDC1Q9NPL8 285 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 MAN2C1Q9NTJ4 1040 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 FKBP14Q9NWM8 211 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 SLC13A4Q9UKG4 626 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 CCDC88CQ9P219 2028 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 TRIOBPQ9H2D6 2365 aa13.62□□□□□ -0.23
NINJ1-204ENST00000489274 CHST10O43529 356 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 FCMRO60667 390 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 NME6O75414 186 aaPredicted RBP13.61□□□□□ -0.23
NINJ1-204ENST00000489274 INMTO95050 263 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 MT-ND2P03891 347 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 SLC35E2P0CK97 266 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 NT5EP21589 574 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 GP2P55259 537 aaKnown RBP13.61□□□□□ -0.23
NINJ1-204ENST00000489274 SKP1P63208 163 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 ALDH6A1Q02252 535 aaKnown RBP13.61□□□□□ -0.23
NINJ1-204ENST00000489274 DUSP5Q16690 384 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 NDUFA9Q16795 377 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 DEFB110Q30KQ9 67 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 SYT6Q5T7P8 510 aaPredicted RBP13.61□□□□□ -0.23
NINJ1-204ENST00000489274 WDR53Q7Z5U6 358 aaPredicted RBP13.61□□□□□ -0.23
NINJ1-204ENST00000489274 VRK2Q86Y07 508 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 CCDC103Q8IW40 242 aa13.61□□□□□ -0.23
NINJ1-204ENST00000489274 CDRT4Q8N9R6 151 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms