RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 HS6ST2Q96MM7 605 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 OR1F2PQ96R84 312 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 POTEKPQ9BYX7 375 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 SYNPO2LQ9H987 977 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 CXXC1Q9P0U4 656 aaPredicted RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 MYH7P12883 1935 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PPP6CO00743 305 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 CLEC3AO75596 197 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 GNMTQ14749 295 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM164Q5U3C3 297 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 DESI1Q6ICB0 168 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 RNF111Q6ZNA4 994 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 ASB15Q8WXK1 588 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 UTP4Q969X6 686 aaKnown RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PGAM5Q96HS1 289 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM184CQ9NVA4 438 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 INTS6Q9UL03 887 aaKnown RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 ENPP4Q9Y6X5 453 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 A0A0A6YYH2 397 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 A6NJ64 397 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 ZNF850A8MQ14 1090 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 CD3GP09693 182 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 IL1RNP18510 177 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 RIDAP52758 137 aaKnown RBP16.74■□□□□ 0.27
NPHP4-209ENST00000489180 SHC2P98077 582 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 NDUFAF5Q5TEU4 345 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 FTMTQ8N4E7 242 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 RHBDF1Q96CC6 855 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 DPH1Q9BZG8 443 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 EMCNQ9ULC0 261 aa16.74■□□□□ 0.27
NPHP4-209ENST00000489180 PTTG1O95997 202 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 GALNT1Q10472 559 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-209ENST00000489180 OR52E8Q6IFG1 317 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 ZER1Q7Z7L7 766 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 ZSCAN4Q8NAM6 433 aaPredicted RBP16.73■□□□□ 0.27
NPHP4-209ENST00000489180 CREB3L4Q8TEY5 395 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 HTR2AP28223 471 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 RPS15AP62244 130 aaKnown RBP16.73■□□□□ 0.27
NPHP4-209ENST00000489180 CLDN10P78369 228 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 ALG10BQ5I7T1 473 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 ZNF709Q8N972 641 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 SCGB1C1Q8TD33 95 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 ZFP90Q8TF47 636 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 SORBS1Q9BX66 1292 aaKnown RBP16.73■□□□□ 0.27
NPHP4-209ENST00000489180 VAPAQ9P0L0 249 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 AKAP12Q02952 1782 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 HMX3A6NHT5 357 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 LYRM1O43325 122 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 IFNA2P01563 188 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 UBE2UQ5VVX9 321 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 ANKK1Q8NFD2 765 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 GATA6Q92908 595 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 NEDD4LQ96PU5 975 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 MVB12BQ9H7P6 319 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 FOLH1BQ9HBA9 442 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 SLC2A4RGQ9NR83 387 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 PPP4R1LQ9P1A2 415 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 KLHL21Q9UJP4 597 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 KRBA1A5PL33 1030 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 UPK1BO75841 260 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 RAB11BQ15907 218 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 MDGA1Q8NFP4 955 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 PEX11GQ96HA9 241 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 ZNF559Q9BR84 538 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 PCDHB16Q9NRJ7 776 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 SLC7A7Q9UM01 511 aa16.73■□□□□ 0.27
NPHP4-209ENST00000489180 PHRF1Q9P1Y6 1649 aaKnown RBP16.73■□□□□ 0.27
NPHP4-209ENST00000489180 RAD1O60671 282 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 SNAPC5O75971 98 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 PLEKHN1Q494U1 663 aaPredicted RBP16.72■□□□□ 0.27
NPHP4-209ENST00000489180 GRHL2Q6ISB3 625 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 METTL2BQ6P1Q9 378 aaKnown RBP16.72■□□□□ 0.27
NPHP4-209ENST00000489180 MR1Q95460 341 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 SLC12A9Q9BXP2 914 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 ARFGEF2Q9Y6D5 1785 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 FRS3O43559 492 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 FBLP22087 321 aaKnown RBP16.72■□□□□ 0.27
NPHP4-209ENST00000489180 ARRB1P49407 418 aaPredicted RBP16.72■□□□□ 0.27
NPHP4-209ENST00000489180 ZNF616Q08AN1 781 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 HYAL4Q2M3T9 481 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 SYT14Q8NB59 555 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 C3orf30Q96M34 536 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 ENPP5Q9UJA9 477 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 MYH10P35580 1976 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 IGKV6-21A0A0C4DH24 114 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 CTBP2P56545 445 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 SELENOWP63302 87 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 TP53I3Q53FA7 332 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM173Q86WV6 379 aaPredicted RBP16.72■□□□□ 0.27
NPHP4-209ENST00000489180 CYB561A3Q8NBI2 242 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 RAB7BQ96AH8 199 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM14AQ9Y6G1 99 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 PEX12O00623 359 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 AMY2AP04746 511 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 CD34P28906 385 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 PTGER1P34995 402 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 LRIF1Q5T3J3 769 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 C3orf33Q6P1S2 294 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 TMEM205Q6UW68 189 aa16.72■□□□□ 0.27
NPHP4-209ENST00000489180 ZNF761Q86XN6 746 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms