RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CYP3A5P20815 502 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 IL2RGP31785 369 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 SFNP31947 248 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 HPDP32754 393 aaPredicted RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 GMFBP60983 142 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 HTD2P86397 168 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 KLF5Q13887 457 aaPredicted RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 CAPRIN1Q14444 709 aaKnown RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 INAQ16352 499 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 C2orf83Q53S99 150 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 PAN3Q58A45 887 aaKnown RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 HSP90AA5PQ58FG0 334 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 DNAJC21Q5F1R6 531 aaKnown RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 GPR142Q7Z601 462 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 STHQ8IWL8 128 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 GPR137CQ8N3F9 429 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 CCNYQ8ND76 341 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 OR6M1Q8NGM8 313 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 TMEM186Q96B77 213 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 SLCO4A1Q96BD0 722 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 DTD2Q96FN9 168 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 C16orf45Q96MC5 204 aaPredicted RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 NSMCE2Q96MF7 247 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 SLC26A1Q9H2B4 701 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 DDX28Q9NUL7 540 aaKnown RBP2.52□□□□□ -2.01
RFC4-213ENST00000489028 IMPAD1Q9NX62 359 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 TEKT2Q9UIF3 430 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 ATG4BQ9Y4P1 393 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 NOTCH2Q04721 2471 aa2.52□□□□□ -2.01
RFC4-213ENST00000489028 A0A0A6YYD4 124 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 YJEFN3A6XGL0 299 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 H0Y9J4 135 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 TLR4O00206 839 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 SLC28A1O00337 649 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 NDC80O14777 642 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 CPLX1O14810 134 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 NOL3O60936 208 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 DUSP14O95147 198 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 TRIM16O95361 564 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 PRAMEF12O95522 483 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 MT-ATP6P00846 226 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 SFTPBP07988 381 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 MBL2P11226 248 aaPredicted RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 ETS1P14921 441 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 ELK1P19419 428 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 MARCKSP29966 332 aaPredicted RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 STIP1P31948 543 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 KIF5BP33176 963 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 NSFP46459 744 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 RABIFP47224 123 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 RGRP47804 291 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 GPC3P51654 580 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 HNRNPFP52597 415 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 ERVPABLB-1P60509 514 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 POLR2FP61218 127 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 SSTP61278 116 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 RPS4XP62701 263 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 ZNF33BQ06732 778 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 KIAA0040Q15053 153 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 MICAQ29983 383 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 ISXQ2M1V0 245 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 APOOLQ6UXV4 268 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 TAF8Q7Z7C8 310 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 ELMOD2Q8IZ81 293 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 ARL6IP6Q8N6S5 226 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 SIDT2Q8NBJ9 832 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 CCDC110Q8TBZ0 833 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 U2AF1L4Q8WU68 220 aaKnown RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 SPAG8Q99932 426 aaPredicted RBP2.51□□□□□ -2.01
RFC4-213ENST00000489028 ATG10Q9H0Y0 220 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 TRPV6Q9H1D0 765 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 CARD9Q9H257 536 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 TIGARQ9NQ88 270 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 HOMER3Q9NSC5 361 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 TAS2R3Q9NYW6 316 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 RAI14Q9P0K7 980 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 SPASTQ9UBP0 616 aa2.51□□□□□ -2.01
RFC4-213ENST00000489028 MACROD2A1Z1Q3 448 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 GPAA1O43292 621 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 GMNNO75496 209 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 CXCL14O95715 111 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 GUCA1CO95843 209 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 PGK2P07205 417 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 SERPINF2P08697 491 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 WNT2P09544 360 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 GHRP10912 638 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 IDSP22304 550 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 CNN1P51911 297 aaKnown RBP2.5□□□□□ -2.01
RFC4-213ENST00000489028 SRP54P61011 504 aaKnown RBP2.5□□□□□ -2.01
RFC4-213ENST00000489028 HERV-K104P63124 156 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 CCZ1BP86790 482 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 CCZ1P86791 482 aaPredicted RBP2.5□□□□□ -2.01
RFC4-213ENST00000489028 KRT31Q15323 416 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 TAF7Q15545 349 aaPredicted RBP2.5□□□□□ -2.01
RFC4-213ENST00000489028 MPPE1Q53F39 396 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 MS4A13Q5J8X5 152 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 C12orf60Q5U649 245 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 TAF3Q5VWG9 929 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 DMKNQ6E0U4 476 aaPredicted RBP2.5□□□□□ -2.01
RFC4-213ENST00000489028 C2orf66Q6UXQ4 117 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms