RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 DIO3P55073 304 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 FBXW4P57775 412 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 C21orf58P58505 322 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 KCNJ2P63252 427 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 MLC1Q15049 377 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 EIF2S3LQ2VIR3 472 aaKnown RBP13.86□□□□□ -0.19
CXCL12-207ENST00000488591 PGS1Q32NB8 556 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 NXNQ6DKJ4 435 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 OGFOD2Q6N063 350 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 BNC2Q6ZN30 1099 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-207ENST00000488591 NUP54Q7Z3B4 507 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 RIMKLAQ8IXN7 391 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 SLC34A3Q8N130 599 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 KRTCAP2Q8N6L1 136 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 DIO2Q92813 273 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 OMA1Q96E52 524 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 VSTM2LQ96N03 204 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 C7orf26Q96N11 449 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 GPR137Q96N19 417 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 SECISBP2Q96T21 854 aaKnown RBP13.86□□□□□ -0.19
CXCL12-207ENST00000488591 BHLHE41Q9C0J9 482 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-207ENST00000488591 SH2D2AQ9NP31 389 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 DEPPQ9NTK1 212 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 OR10H1Q9Y4A9 318 aa13.86□□□□□ -0.19
CXCL12-207ENST00000488591 CHCHD2Q9Y6H1 151 aaPredicted RBP13.86□□□□□ -0.19
CXCL12-207ENST00000488591 GOLGA8QA0A0J9YX86 632 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 GOLGA8OA6NCC3 632 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 GOLGA8NF8WBI6 632 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 EMC8O43402 210 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 ASNA1O43681 348 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 REM1O75628 298 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 ABCB1P08183 1280 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 EPHA3P29320 983 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 PIGAP37287 484 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 RFC3P40938 356 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 CLNS1AP54105 237 aaKnown RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 PRKAG1P54619 331 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 CORO7P57737 925 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 PPIAP62937 165 aaKnown RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 PRR5P85299 388 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 VPS26BQ4G0F5 336 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 HSP90B2PQ58FF3 399 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 SZRD1Q7Z422 152 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 SLC22A16Q86VW1 577 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 SLC44A2Q8IWA5 706 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 NUP43Q8NFH3 380 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 SPPL2AQ8TCT8 520 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 OR5P2Q8WZ92 322 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 DUSP26Q9BV47 211 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 TSPAN10Q9H1Z9 355 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 WDR55Q9H6Y2 383 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 IL1RL2Q9HB29 575 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 ZNF446Q9NWS9 450 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 MRTO4Q9UKD2 239 aaKnown RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 BOKQ9UMX3 212 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.85□□□□□ -0.19
CXCL12-207ENST00000488591 TENM4Q6N022 2769 aa13.85□□□□□ -0.19
CXCL12-207ENST00000488591 ESPL1Q14674 2120 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 ANKRD33BA6NCL7 494 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 CFLARO15519 480 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 DIAPH2O60879 1101 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 SNX4O95219 450 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 CT45A8P0DMV1 189 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 CT45A9P0DMV2 189 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 EFNA1P20827 205 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-207ENST00000488591 IL12BP29460 328 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 DNASE1L1P49184 302 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 MRPS22P82650 360 aaKnown RBP13.84□□□□□ -0.19
CXCL12-207ENST00000488591 DPY19L1Q2PZI1 675 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.84□□□□□ -0.19
CXCL12-207ENST00000488591 CYP27C1Q4G0S4 372 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 CT45A2Q5DJT8 189 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 RNFT1Q5M7Z0 435 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 PRAMEF20Q5VT98 475 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 TMEM198Q66K66 360 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 PAOXQ6QHF9 649 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 CAMKMTQ7Z624 323 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 SIAH3Q8IW03 269 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 GHDCQ8N2G8 530 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 VPS37AQ8NEZ2 397 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 TMBIM1Q969X1 311 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 TMCO6Q96DC7 493 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 MAGEB18Q96M61 343 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 COL21A1Q96P44 957 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 DOHHQ9BU89 302 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 TTTY12Q9BZ98 90 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 METTL7AQ9H8H3 244 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 Q9N2J8 555 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 TUBA8Q9NY65 449 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-207ENST00000488591 CNOT11Q9UKZ1 510 aaKnown RBP13.84□□□□□ -0.19
CXCL12-207ENST00000488591 PCDHGB4Q9UN71 923 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 OSGIN2Q9Y236 505 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 SNX8Q9Y5X2 465 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 USH1CQ9Y6N9 552 aa13.84□□□□□ -0.19
CXCL12-207ENST00000488591 A0A0G2JMM0 328 aa13.83□□□□□ -0.2
CXCL12-207ENST00000488591 A0A1W2PPB8 328 aa13.83□□□□□ -0.2
CXCL12-207ENST00000488591 A0A1W2PRS3 328 aa13.83□□□□□ -0.2
CXCL12-207ENST00000488591 PINLYPA6NC86 204 aa13.83□□□□□ -0.2
CXCL12-207ENST00000488591 OR6C70A6NIJ9 312 aa13.83□□□□□ -0.2
CXCL12-207ENST00000488591 FAM166BA8MTA8 275 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms