RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SMYD1Q8NB12 490 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 OR1B1Q8NGR6 318 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 MR1Q95460 341 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 SLC35C1Q96A29 364 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 ULK4Q96C45 1275 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 RBM18Q96H35 190 aaKnown RBP3.44□□□□□ -1.86
ITGB1-214ENST00000488427 GLT1D1Q96MS3 346 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 TAAR6Q96RI8 345 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 ADNPQ9H2P0 1102 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 MIS18AQ9NYP9 233 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 MRPL11Q9Y3B7 192 aaKnown RBP3.44□□□□□ -1.86
ITGB1-214ENST00000488427 USP9YO00507 2555 aaPredicted RBP3.44□□□□□ -1.86
ITGB1-214ENST00000488427 ELP1O95163 1332 aa3.44□□□□□ -1.86
ITGB1-214ENST00000488427 CENPEQ02224 2701 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 MTORP42345 2549 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 PCNX2A6NKB5 2137 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 MYH7BA7E2Y1 1941 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 A0A1B0GTH9 108 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ANKDD1BA6NHY2 528 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 FBP2O00757 339 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ZNF749O43361 778 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 TXNL1O43396 289 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ATP9AO75110 1047 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 GH1P01241 217 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 CENPBP07199 599 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 SNU13P55769 128 aaKnown RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 SCARB2Q14108 478 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 POM121L1PQ3SYA9 428 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ANKRD20A4Q4UJ75 823 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ANKRD20A8PQ5CZ79 823 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 VWA2Q5GFL6 755 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ANKRD20A2Q5SQ80 823 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 MPP7Q5T2T1 576 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ANKRD20A1Q5TYW2 823 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ANKRD20A3Q5VUR7 823 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 RSBN1Q5VWQ0 802 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 LYPLAL1Q5VWZ2 237 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 CYP4V2Q6ZWL3 525 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ZC3H3Q8IXZ2 948 aaKnown RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ICA1LQ8NDH6 482 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 TCP11Q8WWU5 503 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 SMPDL3AQ92484 453 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 SNRNP40Q96DI7 357 aaKnown RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 C1orf147Q96MC9 270 aaPredicted RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 TNFRSF13CQ96RJ3 184 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 TMEM206Q9H813 350 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 GRPEL1Q9HAV7 217 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 CD209Q9NNX6 404 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 DNAJC17Q9NVM6 304 aaKnown RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 FAM120CQ9NX05 1096 aaKnown RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 GPR83Q9NYM4 423 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 SENP1Q9P0U3 644 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 ERVK-19Q9WJR5 959 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 HBS1LQ9Y450 684 aaKnown RBP3.43□□□□□ -1.86
ITGB1-214ENST00000488427 CELSR3Q9NYQ7 3312 aa3.43□□□□□ -1.86
ITGB1-214ENST00000488427 NF1P21359 2839 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 MED13LQ71F56 2210 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 IGKV6D-41A0A0C4DH26 115 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 A0A1B0GVY2 172 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 IGLON5A6NGN9 336 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 SHISA7A6NL88 538 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 A8MU76 341 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 E9PAM4 449 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 ACSL4O60488 711 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 LRP3O75074 770 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 GAS8O95995 478 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 HMOX1P09601 288 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 SUPT20HL2P0C7V6 817 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 ELK3P41970 407 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 LIMK2P53671 638 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 CCNA1P78396 465 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 GPM6BQ13491 265 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 SIX1Q15475 284 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-214ENST00000488427 HECTD3Q5T447 861 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 C9orf66Q5T8R8 295 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 FKBP1CQ5VVH2 108 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 SNRNP48Q6IEG0 339 aaKnown RBP3.42□□□□□ -1.86
ITGB1-214ENST00000488427 EMBQ6PCB8 327 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 TMEM64Q6YI46 380 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 FAM47EQ6ZV65 393 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 C5orf24Q7Z6I8 188 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 GLRX5Q86SX6 157 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 C17orf64Q86WR6 236 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 KLHDC8AQ8IYD2 350 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 UXS1Q8NBZ7 420 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 GOLGA5Q8TBA6 731 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 LIPHQ8WWY8 451 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 RFT1Q96AA3 541 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 RASL10BQ96S79 203 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 COPS7BQ9H9Q2 264 aaPredicted RBP3.42□□□□□ -1.86
ITGB1-214ENST00000488427 PLEKHA3Q9HB20 300 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 IL1RAPQ9NPH3 570 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 ABCB8Q9NUT2 735 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 ETV7Q9Y603 341 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 CPQQ9Y646 472 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 FN1P02751 2386 aaKnown RBP3.42□□□□□ -1.86
ITGB1-214ENST00000488427 AGRNO00468 2067 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 KIAA1671Q9BY89 1806 aa3.42□□□□□ -1.86
ITGB1-214ENST00000488427 LRBAP50851 2863 aa3.41□□□□□ -1.86
ITGB1-214ENST00000488427 ICE1Q9Y2F5 2266 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms