RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CYC1P08574 325 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 SBK3P0C264 359 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 CTAGE8P0CG41 777 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 HIST1H1TP22492 207 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 GCAP28676 217 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 PHBP35232 272 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 MSX2P35548 267 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 SOX3P41225 446 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 CA7P43166 264 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 MTNR1BP49286 362 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 SERPINB8P50452 374 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 HLCSP50747 726 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 RAP1GDS1P52306 607 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 CDH13P55290 713 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 HSD17B7P56937 341 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 AP2B1P63010 937 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ADORA2A-AS1P86434 159 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 FOLH1Q04609 750 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 STX4Q12846 297 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 NAB1Q13506 487 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ACAP2Q15057 778 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 TBCCQ15814 346 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 INAQ16352 499 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 FAM83EQ2M2I3 478 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 AP5B1Q2VPB7 878 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 FAM153CQ494X1 144 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 GAGE13Q4V321 117 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 TCHHL1Q5QJ38 904 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 TEX35Q5T0J7 233 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 KHDRBS2Q5VWX1 349 aaKnown RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 OR4C11Q6IEV9 310 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 FAM180BQ6P0A1 224 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 Q6ZSN1 163 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 SIAH3Q8IW03 269 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 CHERPQ8IWX8 916 aaKnown RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 CTAGE4Q8IX94 777 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 LAS2Q8IYD9 372 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 MMP21Q8N119 569 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 CYP4Z2PQ8N1L4 340 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 RPRMLQ8N4K4 120 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 TMEM156Q8N614 296 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 TMEM178AQ8NBL3 297 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 OR52N2Q8NGI0 321 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 SLC2A12Q8TD20 617 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 DCAKDQ8WVC6 231 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 SLC44A1Q8WWI5 657 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ITLN2Q8WWU7 325 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ATP6V1E2Q96A05 226 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 VMP1Q96GC9 406 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 RAX2Q96IS3 184 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 HBEGFQ99075 208 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 FMO2Q99518 471 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 CNPPD1Q9BV87 410 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 NPLQ9BXD5 320 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF717Q9BY31 904 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 DEFB127Q9H1M4 99 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 EHD1Q9H4M9 534 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ZBTB26Q9HCK0 441 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ADAP2Q9NPF8 381 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 FARSBQ9NSD9 589 aaKnown RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 MTRF1LQ9UGC7 380 aaKnown RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ERVK-11Q9UQG0 969 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 ATG4BQ9Y4P1 393 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 LIPGQ9Y5X9 500 aa5.46□□□□□ -1.54
CDHR3-213ENST00000488386 USP9YO00507 2555 aaPredicted RBP5.46□□□□□ -1.54
CDHR3-213ENST00000488386 LRRK2Q5S007 2527 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 POLEQ07864 2286 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 PRRC2CQ9Y520 2896 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 A0A088AWK7 358 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 A0A1B0GTH9 108 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 A0A1B0GUH1 482 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 SYCE1LA8MT33 242 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 A8MVJ9 347 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 CLDN4O14493 209 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 FCHO1O14526 889 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TFECO14948 347 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ASNA1O43681 348 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 KLK8O60259 260 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 NME6O75414 186 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ZFAND5O76080 213 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 AIFM1O95831 613 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 JUNP05412 331 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 CT62P0C5K7 136 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 MYBL2P10244 700 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ABOP16442 354 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF24P17028 368 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ZNF10P21506 573 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 BSGP35613 385 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 PIGAP37287 484 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 RPS19P39019 145 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 CASP2P42575 452 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 MAGEA12P43365 314 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 DNASE1L1P49184 302 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 SSR4P51571 173 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ALDH18A1P54886 795 aaKnown RBP5.45□□□□□ -1.54
CDHR3-213ENST00000488386 NRG3P56975 720 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 HERVK_113P63132 956 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 ERVK-8P63133 956 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TNFRSF17Q02223 184 aa5.45□□□□□ -1.54
CDHR3-213ENST00000488386 TGM3Q08188 693 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms