RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 SYNGR4O95473 234 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 WNT2P09544 360 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 GHRP10912 638 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 ZNF19P17023 458 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 IDSP22304 550 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 ACP1P24666 158 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 MAT2AP31153 395 aaKnown RBP2.93□□□□□ -1.94
TTC3-220ENST00000487711 CNN1P51911 297 aaKnown RBP2.93□□□□□ -1.94
TTC3-220ENST00000487711 RAG2P55895 527 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 NLRP11P59045 1033 aaKnown RBP2.93□□□□□ -1.94
TTC3-220ENST00000487711 BPIFB3P59826 476 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 HAND2P61296 217 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 GFPT1Q06210 699 aaPredicted RBP2.93□□□□□ -1.94
TTC3-220ENST00000487711 ZNF33BQ06732 778 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 WASHC5Q12768 1159 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 BNIP1Q12981 228 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 RPA4Q13156 261 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 TSTA3Q13630 321 aaPredicted RBP2.93□□□□□ -1.94
TTC3-220ENST00000487711 TGIF1Q15583 401 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 CMPK2Q5EBM0 449 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 BNIPLQ7Z465 357 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 ERICH1Q86X53 443 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 Q8N7P7 452 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 Q8N9G6 341 aaPredicted RBP2.93□□□□□ -1.94
TTC3-220ENST00000487711 OR52J3Q8NH60 311 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 RFESDQ8TAC1 157 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 KRT35Q92764 455 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 P3H4Q92791 437 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 LHX4Q969G2 390 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 SLCO4A1Q96BD0 722 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 EEF2KMTQ96G04 330 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 ZNF560Q96MR9 790 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 APOOQ9BUR5 198 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 TEX13BQ9BXU2 312 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 TSPY26PQ9H489 355 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 KCNMB3Q9NPA1 279 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 HPS4Q9NQG7 708 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 VNN3Q9NY84 501 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 KNSTRNQ9Y448 316 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 ZNF175Q9Y473 711 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 RNF115Q9Y4L5 304 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 AKNAQ7Z591 1439 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 CASKIN1Q8WXD9 1431 aa2.93□□□□□ -1.94
TTC3-220ENST00000487711 POLA1P09884 1462 aaPredicted RBP2.92□□□□□ -1.94
TTC3-220ENST00000487711 CCDC18Q5T9S5 1454 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 MFSD2BA6NFX1 497 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 E7ENQ6 273 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 ARPC1BO15143 372 aaKnown RBP2.92□□□□□ -1.94
TTC3-220ENST00000487711 NME2P1O60361 137 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 KINO60870 393 aaKnown RBP2.92□□□□□ -1.94
TTC3-220ENST00000487711 DUSP14O95147 198 aaKnown RBP2.92□□□□□ -1.94
TTC3-220ENST00000487711 ALPIP09923 528 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 NPY2RP49146 381 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 ARF5P84085 180 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 ZNF85Q03923 595 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 ZNF79Q15937 498 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 QRICH1Q2TAL8 776 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 C2orf76Q3KRA6 126 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 ATRAIDQ6UW56 229 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 TSEN54Q7Z6J9 526 aaKnown RBP2.92□□□□□ -1.94
TTC3-220ENST00000487711 VASH2Q86V25 355 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 UNC5CLQ8IV45 518 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 ARL10Q8N8L6 244 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 MLKLQ8NB16 471 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 COLGALT1Q8NBJ5 622 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 TFB1MQ8WVM0 346 aaKnown RBP2.92□□□□□ -1.94
TTC3-220ENST00000487711 TMEM37Q8WXS4 190 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 DTD2Q96FN9 168 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 ZNF414Q96IQ9 312 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 CCDC43Q96MW1 224 aaKnown RBP2.92□□□□□ -1.94
TTC3-220ENST00000487711 CASD1Q96PB1 797 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 DEFB118Q96PH6 123 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 NLNQ9BYT8 704 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 MID1IP1Q9NPA3 183 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 FAM153AQ9UHL3 310 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 NTNG1Q9Y2I2 539 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 EHBP1L1Q8N3D4 1523 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 TOPBP1Q92547 1522 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 PDS5BQ9NTI5 1447 aa2.92□□□□□ -1.94
TTC3-220ENST00000487711 LRRC9Q6ZRR7 1453 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 CCNB3Q8WWL7 1395 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 C11orf98E9PRG8 122 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 G3V3Y1 287 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 LCMT2O60294 686 aaKnown RBP2.91□□□□□ -1.94
TTC3-220ENST00000487711 ECDO95905 644 aaPredicted RBP2.91□□□□□ -1.94
TTC3-220ENST00000487711 RGRP47804 291 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 CCL11P51671 97 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 HNRNPFP52597 415 aaKnown RBP2.91□□□□□ -1.94
TTC3-220ENST00000487711 ERVPABLB-1P60509 514 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 CD47Q08722 323 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 ASAH1Q13510 395 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 BTG3Q14201 252 aaPredicted RBP2.91□□□□□ -1.94
TTC3-220ENST00000487711 SMC1AQ14683 1233 aaKnown RBP2.91□□□□□ -1.94
TTC3-220ENST00000487711 KIAA0040Q15053 153 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 ZIC1Q15915 447 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 CARTPTQ16568 116 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 PAN3Q58A45 887 aaKnown RBP2.91□□□□□ -1.94
TTC3-220ENST00000487711 PEX5LQ8IYB4 626 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 UBQLNLQ8IYU4 475 aa2.91□□□□□ -1.94
TTC3-220ENST00000487711 SLC34A3Q8N130 599 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms