RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 RNF148Q8N7C7 305 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNRF1Q8ND25 227 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 CCDC110Q8TBZ0 833 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 DQX1Q8TE96 717 aaKnown RBP2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 GIPC3Q8TF64 312 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 TFB1MQ8WVM0 346 aaKnown RBP2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 C9orf85Q96MD7 179 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 TTYH2Q9BSA4 534 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 ST6GALNAC5Q9BVH7 336 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 CARD6Q9BX69 1037 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZBP1Q9H171 429 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 RPS10P5Q9NQ39 176 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 IMPAD1Q9NX62 359 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 GDAP2Q9NXN4 497 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 SPASTQ9UBP0 616 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 KIF3AQ9Y496 699 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 SYNJ2O15056 1496 aa2.96□□□□□ -1.94
HMGB1P36-201ENST00000487709 FAM205AQ6ZU69 1335 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 ABCC9O60706 1549 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 TRBV7-9A0A0J9YWB2 115 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 EFCAB7A8K855 629 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 H3BTX0 84 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 LCMT2O60294 686 aaKnown RBP2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 RANBP6O60518 1105 aaKnown RBP2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 STK17BO94768 372 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 NDUFA7O95182 113 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 ANP32DO95626 131 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 SEMA4FO95754 770 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 PIGRP01833 764 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 RRASP10301 218 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 SAA4P35542 130 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 SGSHP51688 502 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 NAPAP54920 295 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 YBEYP58557 167 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 PPIAP62937 165 aaKnown RBP2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 COX10Q12887 443 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 OVGP1Q12889 678 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 RUNX3Q13761 415 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 CYLC2Q14093 348 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 SLC10A1Q14973 349 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 INAQ16352 499 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 EPC2Q52LR7 807 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 EIPR1Q53HC9 387 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 MARC1Q5VT66 337 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 MEDAGQ5VYS4 303 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 SCYL2Q6P3W7 929 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 RFWD3Q6PCD5 774 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 BAIAP2L2Q6UXY1 529 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 MARCH9Q86YJ5 346 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 ELMOD2Q8IZ81 293 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 FAM71CQ8NEG0 241 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 CRYGNQ8WXF5 182 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 P3H4Q92791 437 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 NCLNQ969V3 563 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 ELMO2Q96JJ3 720 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 SAMD8Q96LT4 415 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 FOXN4Q96NZ1 517 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 ALG9Q9H6U8 611 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 RBM28Q9NW13 759 aaKnown RBP2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 CLEC5AQ9NY25 188 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 ABCD2Q9UBJ2 740 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 MLXQ9UH92 298 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 RSPH14Q9UHP6 348 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 PLEKHA6Q9Y2H5 1048 aa2.95□□□□□ -1.94
HMGB1P36-201ENST00000487709 GRIN2DO15399 1336 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 UBE4BO95155 1302 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 HCFC1P51610 2035 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 FAM230AA0A1W2PPH8 454 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 PHF1O43189 567 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 TYROBPO43914 113 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 TGFAP01135 160 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 MELTFP08582 738 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 FOLR2P14207 255 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 PVRP15151 417 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 H2AFXP16104 143 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 TNNI3P19429 210 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 PTPN6P29350 595 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 AKT2P31751 481 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 PRDX2P32119 198 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 MAGEA9P43362 315 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 MTTPP55157 894 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 PRKCEQ02156 737 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 ITPK1Q13572 414 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 CD226Q15762 336 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 CCL14Q16627 93 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 TCTEX1D4Q5JR98 221 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 SLC25A30Q5SVS4 291 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 LINC00242Q5T6M2 205 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 FAM219BQ5XKK7 198 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 DMKNQ6E0U4 476 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 PRR5LQ6MZQ0 368 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 REG3GQ6UW15 175 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 TMEM26Q6ZUK4 368 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 PAQR9Q6ZVX9 377 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 LRRC70Q7Z2Q7 622 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 MISPQ8IVT2 679 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 CERS5Q8N5B7 392 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 CNNM3Q8NE01 707 aa2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 ZNF397Q8NF99 534 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P36-201ENST00000487709 RFESDQ8TAC1 157 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms