RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 NAP1L1P55209 391 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 AP1S2P56377 157 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 PPIAP62937 165 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 SORDQ00796 357 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 TIAL1Q01085 375 aaKnown RBP eCLIP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 RGS1Q08116 209 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 TBL3Q12788 808 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 HNRNPA0Q13151 305 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 CTBP1Q13363 440 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 TSTA3Q13630 321 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 HSPB2Q16082 182 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 DEFB113Q30KQ7 82 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 XKR6Q5GH73 641 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 DUPD1Q68J44 220 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 ZNF470Q6ECI4 717 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 PIWIL4Q7Z3Z4 852 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 PRUNE1Q86TP1 453 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 CAND1Q86VP6 1230 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 LNX2Q8N448 690 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 TBC1D19Q8N5T2 526 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 RNF10Q8N5U6 811 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 TMEM251Q8N6I4 163 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 CCDC89Q8N998 374 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 C7orf57Q8NEG2 295 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 TRPV3Q8NET8 790 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 ZCCHC10Q8TBK6 192 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 RNASE6Q93091 150 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 SARAFQ96BY9 339 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 FAM136AQ96C01 138 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 SNF8Q96H20 258 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 OR4K3Q96R72 315 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 SMC6Q96SB8 1091 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 GPR21Q99679 349 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 FAM173AQ9BQD7 235 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 GPATCH1Q9BRR8 931 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 DEFB127Q9H1M4 99 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 PRDM13Q9H4Q3 707 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 PLEKHF2Q9H8W4 249 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 IL1RL2Q9HB29 575 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 SH2D2AQ9NP31 389 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 ACKR4Q9NPB9 350 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 ADAP2Q9NPF8 381 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 NECTIN3Q9NQS3 549 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 QPCTLQ9NXS2 382 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 IKBKGQ9Y6K9 419 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 HIVEP2P31629 2446 aa4.68□□□□□ -1.66
R3HDM1-218ENST00000487294 FBN1P35555 2871 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PRSS29PA6NIE9 313 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 A8MVJ9 347 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PSMD12O00232 456 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 CLDN4O14493 209 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 OR1F1O43749 312 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PRKNO60260 465 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 AVILO75366 819 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 OR2J2O76002 312 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PDE9AO76083 593 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 MYO1DO94832 1006 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 OR6B1O95007 311 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 EPPINO95925 133 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ZSCAN5DPP0CG00 497 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 GATA3P23771 443 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 MAGEA5P43359 124 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 RGS4P49798 205 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ASCL1P50553 236 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 DGKQP52824 942 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 SARNPP82979 210 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 REEP5Q00765 189 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 KIF5AQ12840 1032 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 NAE1Q13564 534 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 CUL1Q13616 776 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 DHX34Q14147 1143 aaKnown RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 SLC10A1Q14973 349 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PHKG1Q16816 387 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 MPEG1Q2M385 716 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ADPRMQ3LIE5 342 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 C1orf185Q5T7R7 199 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 WLSQ5T9L3 541 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 SHEQ5VZ18 495 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 UGT3A1Q6NUS8 523 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 CES3Q6UWW8 571 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PRSS57Q6UWY2 283 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 RAD9BQ6WBX8 426 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 RTL4Q6ZR62 310 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 GALNT7Q86SF2 657 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ZBTB46Q86UZ6 589 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PRIMA1Q86XR5 153 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 DENND6AQ8IWF6 608 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 ZNF595Q8IYB9 648 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 CPNE9Q8IYJ1 553 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 LRRC75A-AS1Q8N1F1 130 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 CA13Q8N1Q1 262 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 LRRC25Q8N386 305 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 TXLNBQ8N3L3 684 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 FBXW8Q8N3Y1 598 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 OTUD6BQ8N6M0 293 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 RELL2Q8NC24 303 aaPredicted RBP4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 PDPRQ8NCN5 879 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 MORN4Q8NDC4 146 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 MCUQ8NE86 351 aa4.67□□□□□ -1.66
R3HDM1-218ENST00000487294 WFDC11Q8NEX6 87 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms