RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 C9orf66Q5T8R8 295 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 TAF3Q5VWG9 929 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 SEL1L3Q68CR1 1132 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 ZNF841Q6ZN19 808 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 TSEN54Q7Z6J9 526 aaKnown RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 ZBTB44Q8NCP5 570 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 ABCC13Q9NSE7 274 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 STARD5Q9NSY2 213 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 ATXN10Q9UBB4 475 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 PURGQ9UJV8 347 aaKnown RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 CHMP2BQ9UQN3 213 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 DHRS7Q9Y394 339 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 AP1M2Q9Y6Q5 423 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 A0A087WZY1 265 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 TTC26A0AVF1 554 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 LRIT2A6NDA9 550 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 NPIPA2E9PIF3 369 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 H3BMH7 237 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 DIRAS3O95661 229 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 OAS1P00973 400 aaKnown RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 IFNB1P01574 187 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 CA3P07451 260 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 HEXBP07686 556 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 SNRPCP09234 159 aaKnown RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 ANXA4P09525 319 aaPredicted RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 PAICSP22234 425 aaKnown RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 PTPN4P29074 926 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 ETV5P41161 510 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 GSK3BP49841 420 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 NAPAP54920 295 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 MFAP2P55001 183 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 PPIAP62937 165 aaKnown RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 NAAAQ02083 359 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 FUT7Q11130 342 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 EIF2B1Q14232 305 aaKnown RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 DNAJC21Q5F1R6 531 aaKnown RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 ACER2Q5QJU3 275 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 SPINK14Q6IE38 97 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 STOX1Q6ZVD7 989 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 Q8N377 158 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 ARFGAP2Q8N6H7 521 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 RASL10AQ92737 203 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 DLX4Q92988 240 aaPredicted RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 FAM173AQ9BQD7 235 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 CCDC28BQ9BUN5 200 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 ST6GALNAC5Q9BVH7 336 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 TSPY26PQ9H489 355 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 LIN28AQ9H9Z2 209 aaKnown RBP3.67□□□□□ -1.82
SMC4-218ENST00000486711 POLD4Q9HCU8 107 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 GPR83Q9NYM4 423 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 KLRF1Q9NZS2 232 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 GHRLQ9UBU3 117 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 ATP6V1HQ9UI12 483 aa3.67□□□□□ -1.82
SMC4-218ENST00000486711 IGHV3-16A0A0C4DH30 117 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 RPL37AP8A6NKH3 93 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 K7EPI3 171 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 NDC80O14777 642 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 GUCA1CO95843 209 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 IGSF6O95976 241 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 AK1P00568 194 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 IGHV3-13P01766 116 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 HCKP08631 526 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 GSTT2P0CG29 244 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 GSTT2BP0CG30 244 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 CALCBP10092 127 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 TSPAN8P19075 237 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 CYP2F1P24903 491 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 DPP4P27487 766 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 AXLP30530 894 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 RFC2P35250 354 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 TRPC1P48995 793 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 MRPS6P82932 125 aaKnown RBP3.66□□□□□ -1.82
SMC4-218ENST00000486711 CD226Q15762 336 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 ZNF506Q5JVG8 444 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 DMKNQ6E0U4 476 aaPredicted RBP3.66□□□□□ -1.82
SMC4-218ENST00000486711 ZNF343Q6P1L6 599 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 LRRC8BQ6P9F7 803 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 GPRIN3Q6ZVF9 776 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 OR4F17Q8NGA8 305 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 OR4Q3Q8NH05 313 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 MCHR2Q969V1 340 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 OR4F4Q96R69 305 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 THUMPD2Q9BTF0 503 aaKnown RBP3.66□□□□□ -1.82
SMC4-218ENST00000486711 CARD6Q9BX69 1037 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 CCSER1Q9C0I3 900 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 ADNPQ9H2P0 1102 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 KAT8Q9H7Z6 458 aaKnown RBP3.66□□□□□ -1.82
SMC4-218ENST00000486711 ADGRL4Q9HBW9 690 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 ESM1Q9NQ30 184 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 TRPV5Q9NQA5 729 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 FAM114A2Q9NRY5 505 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 CENPMQ9NSP4 180 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 SH3BGRL2Q9UJC5 107 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 FOXJ3Q9UPW0 622 aa3.66□□□□□ -1.82
SMC4-218ENST00000486711 IGKV6D-41A0A0C4DH26 115 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 TRABD2BA6NFA1 517 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 MFSD2BA6NFX1 497 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 WASH3PC4AMC7 463 aa3.65□□□□□ -1.83
SMC4-218ENST00000486711 C11orf98E9PRG8 122 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms