RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PRPH2P23942 346 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 GCKP35557 465 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 SERPINB5P36952 375 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 MC3RP41968 323 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 PPICP45877 212 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 EMDP50402 254 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 ZNF844Q08AG5 666 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 ARL13AQ5H913 290 aaPredicted RBP11.82□□□□□ -0.52
CHMP3-208ENST00000486404 WLSQ5T9L3 541 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 FAM71E1Q6IPT2 247 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 TMEM107Q6UX40 140 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 ANGPTL8Q6UXH0 198 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 SIMC1Q8NDZ2 872 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 BTBD9Q96Q07 612 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 CCT7Q99832 543 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 TMEM109Q9BVC6 243 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 SLC6A15Q9H2J7 730 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 ANKRA2Q9H9E1 313 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 FOLH1BQ9HBA9 442 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 DDX18Q9NVP1 670 aaKnown RBP11.82□□□□□ -0.52
CHMP3-208ENST00000486404 TAS2R9Q9NYW1 312 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 TNFRSF10DQ9UBN6 386 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 C15orf41Q9Y2V0 281 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 CACNA1DQ01668 2161 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 CRYBG3Q68DQ2 2970 aa11.82□□□□□ -0.52
CHMP3-208ENST00000486404 PRAMEF25A6NGN4 478 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 MYO1GB0I1T2 1018 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 GNB5O14775 395 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 PIP5K1BO14986 540 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 PDPK1O15530 556 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TRIM3O75382 744 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-208ENST00000486404 REM1O75628 298 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TUBBP07437 444 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ABCB1P08183 1280 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-208ENST00000486404 MYZAPP0CAP1 466 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 DDX5P17844 614 aaKnown RBP11.81□□□□□ -0.52
CHMP3-208ENST00000486404 DRD5P21918 477 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ELAVL4P26378 380 aaKnown RBP11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ACVR2AP27037 513 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 MAPK1P28482 360 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 GPC1P35052 558 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 HPCAL1P37235 193 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 CASP3P42574 277 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TRPC1P48995 793 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 CORO7P57737 925 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ZNHIT3Q15649 155 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-208ENST00000486404 CEBPEQ15744 281 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ZNF630Q2M218 657 aaPredicted RBP11.81□□□□□ -0.52
CHMP3-208ENST00000486404 RNF165Q6ZSG1 346 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ACAD11Q709F0 780 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 NUP54Q7Z3B4 507 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 SZRD1Q7Z422 152 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 OR7G2Q8NG99 324 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 CLHC1Q8NHS4 586 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ZFP28Q8NHY6 868 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ASB5Q8WWX0 329 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 RND1Q92730 232 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 GFM2Q969S9 779 aaKnown RBP11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TMBIM1Q969X1 311 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 PPCDCQ96CD2 204 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TMCO6Q96DC7 493 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 DTNBP1Q96EV8 351 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TMEM41AQ96HV5 264 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 COL21A1Q96P44 957 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 ANGPTL4Q9BY76 406 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TMED5Q9Y3A6 229 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 TRAF6Q9Y4K3 522 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 DNAJC15Q9Y5T4 150 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 NBPF19A0A087WUL8 3843 aa11.81□□□□□ -0.52
CHMP3-208ENST00000486404 A0A1B0GVC2 190 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 FAM90A27PA6NNH2 459 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 TMEM114B3SHH9 223 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 NPIPB8E9PQR5 432 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 ADAM10O14672 748 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 TO15178 435 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 CTIFO43310 598 aaKnown RBP11.8□□□□□ -0.52
CHMP3-208ENST00000486404 AKAP10O43572 662 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 PLOD3O60568 738 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 WDR1O75083 606 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 UGT2B11O75310 529 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 SKAP2O75563 359 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-208ENST00000486404 HSPA4LO95757 839 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 BPGMP07738 259 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 SDC1P18827 310 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 TACR1P25103 407 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 GRNP28799 593 aaKnown RBP11.8□□□□□ -0.52
CHMP3-208ENST00000486404 CHRNB4P30926 498 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 ASMTP46597 345 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
CHMP3-208ENST00000486404 HSPB3Q12988 150 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 EFR3AQ14156 821 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 GXYLT1Q4G148 440 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 CEP85LQ5SZL2 805 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 C1orf185Q5T7R7 199 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 SP5Q6BEB4 398 aaPredicted RBP11.8□□□□□ -0.52
CHMP3-208ENST00000486404 SLC30A6Q6NXT4 461 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 B3GNT6Q6ZMB0 384 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 LARP4Q71RC2 724 aaKnown RBP eCLIP11.8□□□□□ -0.52
CHMP3-208ENST00000486404 CROCCP2Q86T23 111 aa11.8□□□□□ -0.52
CHMP3-208ENST00000486404 SLC44A2Q8IWA5 706 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms