RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ZNF766Q5HY98 468 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 FNDC7Q5VTL7 733 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ACSM2BQ68CK6 577 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 TTC19Q6DKK2 380 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 SLC25A25Q6KCM7 469 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 NOXRED1Q6NXP6 359 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 FAM111BQ6SJ93 734 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 TMEM64Q6YI46 380 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 IKBIPQ70UQ0 350 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 RIMKLAQ8IXN7 391 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 DND1Q8IYX4 353 aaKnown RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 RPRMLQ8N4K4 120 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 CCNYL1Q8N7R7 359 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 BCORP1Q8N888 145 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 POGLUT1Q8NBL1 392 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 OR7G1Q8NGA0 311 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 OR5L2Q8NGL0 311 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 PSMA8Q8TAA3 256 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 PAQR8Q8TEZ7 354 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 RIT1Q92963 219 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 RELTQ969Z4 430 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ZNF524Q96C55 264 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ART5Q96L15 291 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 SMC6Q96SB8 1091 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 SH3GL2Q99962 352 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 OR8D2Q9GZM6 311 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 WWTR1Q9GZV5 400 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ILKAPQ9H0C8 392 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 ZDHHC11Q9H8X9 412 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 WDR41Q9HAD4 459 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 TMBIM4Q9HC24 238 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 PNO1Q9NRX1 252 aaKnown RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 ASIC5Q9NY37 505 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 TMED5Q9Y3A6 229 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 CHCHD2Q9Y6H1 151 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 VPS13CQ709C8 3753 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 A0A087WV62 115 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 LOC100289279A0A1B0GTE1 492 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 A0A1B0GVC2 190 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 TMEM114B3SHH9 223 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 G3V3Y1 287 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SLC28A1O00337 649 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 FCHO1O14526 889 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ZNF195O14628 629 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 KLF11O14901 512 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ANKRD28O15084 1053 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 PCDH7O60245 1069 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SCN2BO60939 215 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SLC25A12O75746 678 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SLITRK5O94991 958 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ZWINTO95229 277 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 LDLRP01130 860 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 IGHG3P01860 377 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CRYABP02511 175 aaKnown RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 SERPINE1P05121 402 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 IL3P08700 152 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CELA3AP09093 270 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ANXA4P09525 319 aaPredicted RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 CT45A8P0DMV1 189 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CT45A9P0DMV2 189 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 NEFHP12036 1026 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 BCKDHAP12694 445 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 COX7A2P14406 83 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SDC1P18827 310 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CSNK2A2P19784 350 aaPredicted RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 DRD5P21918 477 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 GPX3P22352 226 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 GRK2P25098 689 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 RFC3P40938 356 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 PTGDSP41222 190 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SOX3P41225 446 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 PPICP45877 212 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SSR4P51571 173 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ERVK-8P63133 956 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 MRPS35P82673 323 aaKnown RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 IFFO1Q0D2I5 559 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CASP8Q14790 479 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 HEPACAMQ14CZ8 416 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 MLC1Q15049 377 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 TRMT12Q53H54 448 aaKnown RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 KRTCAP3Q53RY4 240 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CT45A2Q5DJT8 189 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CMPK2Q5EBM0 449 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CFAP157Q5JU67 520 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 C6orf136Q5SQH8 315 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CEP85LQ5SZL2 805 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 BICRALQ6AI39 1079 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ANKRD26P1Q6NSI1 321 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 NPSR1Q6W5P4 371 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ACAD11Q709F0 780 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 GALNTL5Q7Z4T8 443 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 CAMKMTQ7Z624 323 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SULF2Q8IWU5 870 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 SAMD14Q8IZD0 417 aaPredicted RBP5.26□□□□□ -1.57
CUX1-208ENST00000485792 OR2L13Q8N349 312 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 MARVELD2Q8N4S9 558 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 HORMAD2Q8N7B1 307 aa5.26□□□□□ -1.57
CUX1-208ENST00000485792 TMEM178AQ8NBL3 297 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms