RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 MDGA2Q7Z553 956 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 TGIF2LYQ8IUE0 185 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 TAGAPQ8N103 731 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 CYP4Z2PQ8N1L4 340 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 VWA5B2Q8N398 1253 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 CHDHQ8NE62 594 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 OR5M9Q8NGP3 310 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 OR2T11Q8NH01 316 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 C16orf52Q8NHV5 167 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ASB15Q8WXK1 588 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 RASL10BQ96S79 203 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 CNPPD1Q9BV87 410 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 EBPLQ9BY08 206 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 OR10A5Q9H207 317 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 GSX1Q9H4S2 264 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 TIMMDC1Q9NPL8 285 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 DNAJB12Q9NXW2 375 aaKnown RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ASIC5Q9NY37 505 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 PRODH2Q9UF12 536 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF639Q9UID6 485 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ERVK-11Q9UQG0 969 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 ERVK-19Q9WJR5 959 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 FIS1Q9Y3D6 152 aa9.21□□□□□ -0.94
CPSF4-213ENST00000484112 POLR3HQ9Y535 204 aaPredicted RBP9.21□□□□□ -0.94
CPSF4-213ENST00000484112 SETD2Q9BYW2 2564 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 A0A087WV62 115 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 C2orf92A0A1B0GVN3 265 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 WASHC1A8K0Z3 465 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 A8MVJ9 347 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 TMEM233B4DJY2 109 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 PLOD3O60568 738 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 SNNO75324 88 aaPredicted RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 NAGAP17050 411 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 BGNP21810 368 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 NTSP30990 170 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 TMED10P49755 219 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 NRG3P56975 720 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 C21orf58P58505 322 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 RPL38P63173 70 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 MGAT2Q10469 447 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 BST1Q10588 318 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 SNTB1Q13884 538 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 PDE7AQ13946 482 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 EBPQ15125 230 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 GXYLT1Q4G148 440 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF628Q5EBL2 1059 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 EMC4Q5J8M3 183 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 HLA-DQA1Q5Y7H0 255 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 DGAT2L6Q6ZPD8 337 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 RTL4Q6ZR62 310 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 ACAD11Q709F0 780 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 C9orf40Q8IXQ3 194 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF781Q8N8C0 355 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF615Q8N8J6 731 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 ANKRD42Q8N9B4 389 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 UCN3Q969E3 161 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 BBS4Q96RK4 519 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 SECISBP2Q96T21 854 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 SORT1Q99523 831 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 PRPF18Q99633 342 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 FOXC2Q99958 501 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 PAIP2Q9BPZ3 127 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 POLDIP3Q9BY77 421 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 WWTR1Q9GZV5 400 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 LIME1Q9H400 295 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 REEP4Q9H6H4 257 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 MANSC1Q9H8J5 431 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 LIN28AQ9H9Z2 209 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 PNPLA3Q9NST1 481 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 HPF1Q9NWY4 346 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 MAT2BQ9NZL9 334 aa9.2□□□□□ -0.94
CPSF4-213ENST00000484112 EIF3LQ9Y262 564 aaKnown RBP9.2□□□□□ -0.94
CPSF4-213ENST00000484112 PINLYPA6NC86 204 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 TTC36A6NLP5 189 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 TRPC5OSA6NMA1 111 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 G3V3Y1 287 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 PLOD2O00469 737 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ACOX3O15254 700 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ITM2AO43736 263 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 PRKNO60260 465 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 COQ9O75208 318 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 CLPSP04118 112 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 FBXO45P0C2W1 286 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 SDC1P18827 310 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 PRPS1L1P21108 318 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 S1PR1P21453 382 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 HPCAL1P37235 193 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 FEN1P39748 380 aaKnown RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 PPIAP62937 165 aaKnown RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 RPP38P78345 283 aaKnown RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 EMX2Q04743 252 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 MLC1Q15049 377 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 GALNTL6Q49A17 601 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 TBCELQ5QJ74 424 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 C6orf136Q5SQH8 315 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 C16orf47Q6ZP98 133 aaPredicted RBP9.19□□□□□ -0.94
CPSF4-213ENST00000484112 RGS9BPQ6ZS82 235 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ZZZ3Q8IYH5 903 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF321PQ8N8H1 164 aa9.19□□□□□ -0.94
CPSF4-213ENST00000484112 ZNF441Q8N8Z8 693 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms