RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MFSD12Q6NUT3 480 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 MSANTD1Q6ZTZ1 278 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 TMEM156Q8N614 296 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 ZNF441Q8N8Z8 693 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 GOT1L1Q8NHS2 421 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SFXN5Q8TD22 340 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 AURKBQ96GD4 344 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 CCDC106Q9BWC9 280 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 YARS2Q9Y2Z4 477 aaKnown RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 IFI6P09912 130 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 ASB18Q6ZVZ8 466 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 C6orf120Q7Z4R8 191 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 RETREG3Q86VR2 466 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 TREML1Q86YW5 311 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 SLC44A2Q8IWA5 706 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-224ENST00000483359 TRIML2Q8N7C3 387 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 CCDC197Q8NCU1 140 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 OR4N2Q8NGD1 307 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 ASB15Q8WXK1 588 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 LCORQ96JN0 433 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-224ENST00000483359 MYLK2Q9H1R3 596 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 IL1RL2Q9HB29 575 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 NTMQ9P121 344 aa16.48■□□□□ 0.23
CPNE1-224ENST00000483359 LEF1Q9UJU2 399 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-224ENST00000483359 KMT2BQ9UMN6 2715 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-224ENST00000483359 DYTNA2CJ06 578 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 OR6B1O95007 311 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 CT45A8P0DMV1 189 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 CT45A9P0DMV2 189 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 RFX3P48380 749 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 ZNHIT3Q15649 155 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 LACTB2Q53H82 288 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 CT45A2Q5DJT8 189 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 IL20RBQ6UXL0 311 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 LGI4Q8N135 537 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 ARMC10Q8N2F6 343 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 SLC16A11Q8NCK7 471 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 OR5D16Q8NGK9 328 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 OR5M3Q8NGP4 307 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 SLC22A8Q8TCC7 542 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 PIK3R3Q92569 461 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 MOAP1Q96BY2 351 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 SLC35G5Q96KT7 338 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 BTBD9Q96Q07 612 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 ADNPQ9H2P0 1102 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 GPATCH2Q9NW75 528 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 GPR55Q9Y2T6 319 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 OR10H1Q9Y4A9 318 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 ZNF451Q9Y4E5 1061 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 FRG2CA6NGY1 282 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 NADKO95544 446 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 ACP2P11117 423 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 PPICP45877 212 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 TUBA3CQ13748 450 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 MAPRE2Q15555 327 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 MMEL1Q495T6 779 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 TUBA3EQ6PEY2 450 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 BHLHB9Q6PI77 547 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 GALNT10Q86SR1 603 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 TAGAPQ8N103 731 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 CDRT4Q8N9R6 151 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 CATSPER1Q8NEC5 780 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 GPR151Q8TDV0 419 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 TM9SF4Q92544 642 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 LRRC37BQ96QE4 947 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 UTP23Q9BRU9 249 aaKnown RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 MFRPQ9BY79 579 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 PAIP1Q9H074 479 aaKnown RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 SERHL2Q9H4I8 314 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 TUBD1Q9UJT1 453 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 FAF1Q9UNN5 650 aaPredicted RBP16.47■□□□□ 0.23
CPNE1-224ENST00000483359 PCDHB14Q9Y5E9 798 aa16.47■□□□□ 0.23
CPNE1-224ENST00000483359 FBP2O00757 339 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 DCTN3O75935 186 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 PTPN6P29350 595 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 ADSLP30566 484 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-224ENST00000483359 GABRA3P34903 492 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 CASRP41180 1078 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 PRIM2P49643 509 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 NRG3P56975 720 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 PLCXD2Q0VAA5 305 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 CYLC2Q14093 348 aaPredicted RBP16.46■□□□□ 0.23
CPNE1-224ENST00000483359 DUSP5Q16690 384 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 PIGGQ5H8A4 983 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 COLEC12Q5KU26 742 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 SPINK14Q6IE38 97 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 C17orf47Q8NEP4 570 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 TP53INP1Q96A56 240 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 SIGLEC12Q96PQ1 595 aa16.46■□□□□ 0.23
CPNE1-224ENST00000483359 LMF2Q9BU23 707 aaKnown RBP16.46■□□□□ 0.23
CPNE1-224ENST00000483359 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.46■□□□□ 0.235e-12■■■■□ 21.5
CPNE1-224ENST00000483359 OR5H15A6NDH6 313 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 A8MVJ9 347 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 SLC22A2O15244 555 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 KCNH1O95259 989 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 ABCD3P28288 659 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 CD96P40200 585 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 CYB561P49447 251 aa16.46■□□□□ 0.22
CPNE1-224ENST00000483359 DCAF7P61962 342 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms