RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PAQR8Q8TEZ7 354 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 FRMD6Q96NE9 622 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 SLX1AQ9BQ83 275 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 FAM173AQ9BQD7 235 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 MYO18BQ8IUG5 2567 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 GCN1Q92616 2671 aaKnown RBP19.25■□□□□ 0.67
SEC13-217ENST00000482647 ANKRD28O15084 1053 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 NME6O75414 186 aaPredicted RBP19.25■□□□□ 0.67
SEC13-217ENST00000482647 CCL3P10147 92 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 IDO1P14902 403 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 KIR3DL1P43629 444 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 CORO7P57737 925 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 FBXW4P57775 412 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 RPP38P78345 283 aaKnown RBP19.25■□□□□ 0.67
SEC13-217ENST00000482647 ZNHIT3Q15649 155 aaPredicted RBP19.25■□□□□ 0.67
SEC13-217ENST00000482647 ACAD11Q709F0 780 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 SLC44A2Q8IWA5 706 aaPredicted RBP19.25■□□□□ 0.67
SEC13-217ENST00000482647 PRR22Q8IZ63 422 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 SLC34A3Q8N130 599 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 FBXW8Q8N3Y1 598 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 ZFP62Q8NB50 900 aaPredicted RBP19.25■□□□□ 0.67
SEC13-217ENST00000482647 ST6GALNAC3Q8NDV1 305 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 VPS37AQ8NEZ2 397 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 OR8J2Q8NGG1 315 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 TESCQ96BS2 214 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 OMA1Q96E52 524 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 OR52B2Q96RD2 323 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 SECISBP2Q96T21 854 aaKnown RBP19.25■□□□□ 0.67
SEC13-217ENST00000482647 DEPPQ9NTK1 212 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 NTMQ9P121 344 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 OR10H1Q9Y4A9 318 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 GPR45Q9Y5Y3 372 aa19.25■□□□□ 0.67
SEC13-217ENST00000482647 TTC36A6NLP5 189 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 G3V3Y1 287 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 UBDO15205 165 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 EMC8O43402 210 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 PPM1BO75688 479 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 CBX6O95503 412 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 ABCB1P08183 1280 aaPredicted RBP19.24■□□□□ 0.67
SEC13-217ENST00000482647 ZNF24P17028 368 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 GNLYP22749 145 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 MST1P26927 711 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 PRKAG1P54619 331 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 NME5P56597 212 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 UFM1P61960 85 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 PRR5P85299 388 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 KCNC4Q03721 635 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 ELOAQ14241 798 aaKnown RBP19.24■□□□□ 0.67
SEC13-217ENST00000482647 DPY19L1Q2PZI1 675 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 GK5Q6ZS86 529 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 NUP54Q7Z3B4 507 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 NUP43Q8NFH3 380 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 OR2M7Q8NG81 312 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 ZBTB18Q99592 522 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 SNX8Q9Y5X2 465 aa19.24■□□□□ 0.67
SEC13-217ENST00000482647 CHCHD2Q9Y6H1 151 aaPredicted RBP19.24■□□□□ 0.67
SEC13-217ENST00000482647 ANKUB1A6NFN9 424 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 CFLARO15519 480 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 C6orf47O95873 294 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 KRT20P35900 424 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 IDH3AP50213 366 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 AQP5P55064 265 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 GSTA3Q16772 222 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 SPDYE7PQ495Y7 208 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 VPS26BQ4G0F5 336 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 CYP27C1Q4G0S4 372 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 KRTCAP3Q53RY4 240 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 TBCELQ5QJ74 424 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 ANXA8L1Q5VT79 327 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 OR4F3Q6IEY1 312 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 NPSR1Q6W5P4 371 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 SZRD1Q7Z422 152 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 PSMA8Q8TAA3 256 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 DIO2Q92813 273 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 TMBIM1Q969X1 311 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 MS4A4EQ96PG1 132 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 LMF2Q9BU23 707 aaKnown RBP19.23■□□□□ 0.67
SEC13-217ENST00000482647 CLMPQ9H6B4 373 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 NEUROD4Q9HD90 331 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 TCF7L2Q9NQB0 619 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 PCDHGB4Q9UN71 923 aa19.23■□□□□ 0.67
SEC13-217ENST00000482647 UBR5O95071 2799 aaPredicted RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 PRSS51A0A1B0GVH4 220 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 ANKRD33BA6NCL7 494 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 OR6C70A6NIJ9 312 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 E9PBE3 544 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 NPIPA5E9PKD4 350 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 RNASET2O00584 256 aaKnown RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 POLR3GO15318 223 aaPredicted RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 REM1O75628 298 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 S100A3P33764 101 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 PIGAP37287 484 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 RFC3P40938 356 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 TDGF1P3P51864 188 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 KCNJ2P63252 427 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 PSG6Q00889 435 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 PLGLB1Q02325 96 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 PDCD4Q53EL6 469 aaKnown RBP19.22■□□□□ 0.67
SEC13-217ENST00000482647 RNFT1Q5M7Z0 435 aa19.22■□□□□ 0.67
SEC13-217ENST00000482647 TMEM198Q66K66 360 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms