RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CAMK1Q14012 370 aa12□□□□□ -0.49
VPS52-218ENST00000482399 NTRK2Q16620 822 aa12□□□□□ -0.49
VPS52-218ENST00000482399 CDKL4Q5MAI5 379 aa12□□□□□ -0.49
VPS52-218ENST00000482399 PXDC1Q5TGL8 231 aa12□□□□□ -0.49
VPS52-218ENST00000482399 BICRALQ6AI39 1079 aa12□□□□□ -0.49
VPS52-218ENST00000482399 PLBD1Q6P4A8 553 aa12□□□□□ -0.49
VPS52-218ENST00000482399 CPOQ8IVL8 374 aa12□□□□□ -0.49
VPS52-218ENST00000482399 SLC38A6Q8IZM9 456 aa12□□□□□ -0.49
VPS52-218ENST00000482399 KLHL36Q8N4N3 616 aa12□□□□□ -0.49
VPS52-218ENST00000482399 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
VPS52-218ENST00000482399 OR51L1Q8NGJ5 315 aa12□□□□□ -0.49
VPS52-218ENST00000482399 FIBINQ8TAL6 211 aa12□□□□□ -0.49
VPS52-218ENST00000482399 UPRTQ96BW1 309 aa12□□□□□ -0.49
VPS52-218ENST00000482399 C16orf58Q96GQ5 468 aa12□□□□□ -0.49
VPS52-218ENST00000482399 IRAK3Q9Y616 596 aa12□□□□□ -0.49
VPS52-218ENST00000482399 ANKRD36A6QL64 1941 aa12□□□□□ -0.49
VPS52-218ENST00000482399 DAPL1A0PJW8 107 aa12□□□□□ -0.49
VPS52-218ENST00000482399 TMEM229AB2RXF0 380 aa12□□□□□ -0.49
VPS52-218ENST00000482399 TEX28O15482 410 aa12□□□□□ -0.49
VPS52-218ENST00000482399 UGDHO60701 494 aa12□□□□□ -0.49
VPS52-218ENST00000482399 ZNF821O75541 412 aaPredicted RBP12□□□□□ -0.49
VPS52-218ENST00000482399 HOXB9P17482 250 aaPredicted RBP12□□□□□ -0.49
VPS52-218ENST00000482399 IFNGR2P38484 337 aa12□□□□□ -0.49
VPS52-218ENST00000482399 METAP1P53582 386 aa12□□□□□ -0.49
VPS52-218ENST00000482399 CLDN2P57739 230 aa12□□□□□ -0.49
VPS52-218ENST00000482399 ADGRD2Q7Z7M1 963 aa12□□□□□ -0.49
VPS52-218ENST00000482399 TMC8Q8IU68 726 aa12□□□□□ -0.49
VPS52-218ENST00000482399 BBS1Q8NFJ9 593 aa12□□□□□ -0.49
VPS52-218ENST00000482399 OR2A12Q8NGT7 310 aa12□□□□□ -0.49
VPS52-218ENST00000482399 ZNF354BQ96LW1 612 aa12□□□□□ -0.49
VPS52-218ENST00000482399 PLEKHB1Q9UF11 243 aaPredicted RBP12□□□□□ -0.49
VPS52-218ENST00000482399 A0A0B4J293 547 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 A0A1W2PRG6 482 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 ERI3O43414 337 aaKnown RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 TSPAN9O75954 239 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 VSX2P58304 361 aaPredicted RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 STXBP1P61764 594 aaKnown RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 RRAS2P62070 204 aaPredicted RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 ID2Q02363 134 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 CDKN3Q16667 212 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 FNDC3BQ53EP0 1204 aaKnown RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 ZDHHC20Q5W0Z9 365 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 SFRP4Q6FHJ7 346 aaPredicted RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 FAM92BQ6ZTR7 304 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 ESPNLQ6ZVH7 1005 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 NRMQ8IXM6 262 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 RNF31Q96EP0 1072 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 RIPOR3Q96MK2 946 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 SLC28A3Q9HAS3 691 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 TDP1Q9NUW8 608 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 MRPL39Q9NYK5 338 aaKnown RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 QSOX1O00391 747 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 GABRPO00591 440 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 PCCBP05166 539 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 GYPBP06028 91 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 MSL3P1P0C860 447 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 KCNC3Q14003 757 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 GPR68Q15743 365 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 FAM71E1Q6IPT2 247 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 RD3Q7Z3Z2 195 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 FAM129CQ86XR2 697 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 PGBD3Q8N328 593 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 NATD1Q8N6N6 113 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 OR8K5Q8NH50 307 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 PIGXQ8TBF5 258 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 RFT1Q96AA3 541 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 SIPA1Q96FS4 1042 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 FERD3LQ96RJ6 166 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 DCLRE1CQ96SD1 692 aaKnown RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 GON7Q9BXV9 100 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 TMEM38AQ9H6F2 299 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 SOCS6O14544 535 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 SLCO2B1O94956 709 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 HRGP04196 525 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 HMGN2P05204 90 aaKnown RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 BMP7P18075 431 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 GCGRP47871 477 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 CLCNKAP51800 687 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 ATP12AP54707 1039 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 TGM3Q08188 693 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 TRIM71Q2Q1W2 868 aaKnown RBP11.99□□□□□ -0.49
VPS52-218ENST00000482399 PLK5Q496M5 336 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 YIF1BQ5BJH7 314 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 VRK2Q86Y07 508 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 TOMM5Q8N4H5 51 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 OR5P2Q8WZ92 322 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 SLC6A18Q96N87 628 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 GPA33Q99795 319 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 GAL3ST1Q99999 423 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 B3GAT2Q9NPZ5 323 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 RASD1Q9Y272 281 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 CHD5Q8TDI0 1954 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 ATG2BQ96BY7 2078 aa11.99□□□□□ -0.49
VPS52-218ENST00000482399 IQCMA0A1B0GVH7 501 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 PLPP1O14494 284 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SMAD9O15198 467 aaKnown RBP11.98□□□□□ -0.49
VPS52-218ENST00000482399 PRODHO43272 600 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 LALBAP00709 142 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 GIFP27352 417 aa11.98□□□□□ -0.49
VPS52-218ENST00000482399 SHC1P29353 583 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms