RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 NPSR1Q6W5P4 371 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 YRDCQ86U90 279 aaKnown RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 LIX1LQ8IVB5 337 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 FAM9CQ8IZT9 166 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 OR7G2Q8NG99 324 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 OR1J4Q8NGS1 313 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ZNF675Q8TD23 568 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 EFHD2Q96C19 240 aaPredicted RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 CCDC126Q96EE4 140 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 TMEM41AQ96HV5 264 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 BBS4Q96RK4 519 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 SPOCK3Q9BQ16 436 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ENKD1Q9H0I2 346 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 UBQLN3Q9H347 655 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ANKZF1Q9H8Y5 726 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 L2HGDHQ9H9P8 463 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 FOLH1BQ9HBA9 442 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ACKR4Q9NPB9 350 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 SERHLQ9NQF3 203 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 MIEF1Q9NQG6 463 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 SLC35C2Q9NQQ7 365 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 QPCTLQ9NXS2 382 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 PRODH2Q9UF12 536 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ITGB1BP2Q9UKP3 347 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 CAMK2AQ9UQM7 478 aa9.57□□□□□ -0.88
CPSF4-212ENST00000482251 INTS1Q8N201 2190 aaKnown RBP9.57□□□□□ -0.88
CPSF4-212ENST00000482251 ARHGAP21Q5T5U3 1957 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 SNPHO15079 494 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 ACOX3O15254 700 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 ICOSLGO75144 302 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 ERN1O75460 977 aaKnown RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 REM1O75628 298 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 GABRA1P14867 456 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 DDCP20711 480 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 PTPN6P29350 595 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 IL12BP29460 328 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 SSTR2P30874 369 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 CRHR1P34998 444 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 CCT5P48643 541 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 VSNL1P62760 191 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 PCLAFQ15004 111 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 ACSF3Q4G176 576 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 LIPMQ5VYY2 423 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 TIGD3Q6B0B8 471 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 ANKRD26P1Q6NSI1 321 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 SEM1Q6ZVN7 128 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 TDRPQ86YL5 185 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 C10orf107Q8IVU9 208 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 SLC44A2Q8IWA5 706 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 NAXEQ8NCW5 288 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 FAM83FQ8NEG4 500 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 OR4N2Q8NGD1 307 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 GFM2Q969S9 779 aaKnown RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 HSPBAP1Q96EW2 488 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 C11orf24Q96F05 449 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 BTBD9Q96Q07 612 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 ADOQ96SZ5 270 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 SECISBP2Q96T21 854 aaKnown RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 TIMP4Q99727 224 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 MECRQ9BV79 373 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 IQCGQ9H095 443 aaKnown RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 OXSMQ9NWU1 459 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 GRID1Q9ULK0 1009 aa9.56□□□□□ -0.88
CPSF4-212ENST00000482251 V9GYY5 206 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-212ENST00000482251 TMEM233B4DJY2 109 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 SCO2O43819 266 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 CDH16O75309 829 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 SPAG7O75391 227 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 RSL1D1O76021 490 aaKnown RBP9.55□□□□□ -0.88
CPSF4-212ENST00000482251 HPNP05981 417 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 CT45A8P0DMV1 189 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 CT45A9P0DMV2 189 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 IGFBP2P18065 325 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 BMP7P18075 431 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 DRD5P21918 477 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 BMP5P22003 454 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 TACR1P25103 407 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 ELAVL4P26378 380 aaKnown RBP9.55□□□□□ -0.88
CPSF4-212ENST00000482251 NTSP30990 170 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 KRT20P35900 424 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 PPICP45877 212 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 RFX3P48380 749 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 DNAJB13P59910 316 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 DCAF7P61962 342 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 RPL38P63173 70 aaKnown RBP9.55□□□□□ -0.88
CPSF4-212ENST00000482251 MYBPHQ13203 477 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 CT45A2Q5DJT8 189 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 OR5M10Q6IEU7 315 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 FAM71E1Q6IPT2 247 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 GALNT18Q6P9A2 607 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 PLXDC2Q6UX71 529 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 LARP4Q71RC2 724 aaKnown RBP eCLIP9.55□□□□□ -0.88
CPSF4-212ENST00000482251 NUP54Q7Z3B4 507 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 TMEM200AQ86VY9 491 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 SAMD14Q8IZD0 417 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-212ENST00000482251 EIF1ADQ8N9N8 165 aaKnown RBP9.55□□□□□ -0.88
CPSF4-212ENST00000482251 ACBD4Q8NC06 268 aa9.55□□□□□ -0.88
CPSF4-212ENST00000482251 RELL2Q8NC24 303 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-212ENST00000482251 TNIP2Q8NFZ5 429 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms