RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZZZ3Q8IYH5 903 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 CCNYL1Q8N7R7 359 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 LRRN4CLQ8ND94 238 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 FAM83FQ8NEG4 500 aaPredicted RBP16.93■□□□□ 0.3
CLK1-211ENST00000481641 KIF18AQ8NI77 898 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 RDH11Q8TC12 318 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 ABTB1Q969K4 478 aaPredicted RBP16.93■□□□□ 0.3
CLK1-211ENST00000481641 TMBIM1Q969X1 311 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 L3HYPDHQ96EM0 354 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 WDYHV1Q96HA8 205 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 TRIB1Q96RU8 372 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 OSBPL11Q9BXB4 747 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 PRDM14Q9GZV8 571 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 GSTO2Q9H4Y5 243 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 SERHLQ9NQF3 203 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 KLRF1Q9NZS2 232 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 PSMC3IPQ9P2W1 217 aaPredicted RBP16.93■□□□□ 0.3
CLK1-211ENST00000481641 PRODH2Q9UF12 536 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 AKAP6Q13023 2319 aa16.93■□□□□ 0.3
CLK1-211ENST00000481641 MED13LQ71F56 2210 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 UBFD1O14562 309 aaKnown RBP16.92■□□□□ 0.3
CLK1-211ENST00000481641 SNPHO15079 494 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 ACOX3O15254 700 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 REM1O75628 298 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 ZWINTO95229 277 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 DRD5P21918 477 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 TIA1P31483 386 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLK1-211ENST00000481641 UQCRC1P31930 480 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 AGFG1P52594 562 aaKnown RBP16.92■□□□□ 0.3
CLK1-211ENST00000481641 PKNOX1P55347 436 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 CORO7P57737 925 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 ACSM2AQ08AH3 577 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 ACSM2BQ68CK6 577 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 SLC30A6Q6NXT4 461 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 POMZP3Q6PJE2 187 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 LCA5Q86VQ0 697 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 GBP7Q8N8V2 638 aaPredicted RBP16.92■□□□□ 0.3
CLK1-211ENST00000481641 WDSUB1Q8N9V3 476 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 ZNF675Q8TD23 568 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 ACMSDQ8TDX5 336 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 MID1IP1Q9NPA3 183 aa16.92■□□□□ 0.3
CLK1-211ENST00000481641 GPR55Q9Y2T6 319 aaPredicted RBP16.92■□□□□ 0.3
CLK1-211ENST00000481641 PRAMEF25A6NGN4 478 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 FRG2CA6NGY1 282 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 G3V2L1 256 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 KIF2AO00139 706 aaPredicted RBP16.91■□□□□ 0.3
CLK1-211ENST00000481641 TO15178 435 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 ENO1P06733 434 aaKnown RBP16.91■□□□□ 0.3
CLK1-211ENST00000481641 GSTA1P08263 222 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 DRD2P14416 443 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 ZNF136P52737 540 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 DCAF7P61962 342 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 SPIN4Q56A73 249 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 NHSL2Q5HYW2 709 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 TMEM81Q6P7N7 255 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 PLXDC2Q6UX71 529 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 NPSR1Q6W5P4 371 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 LACC1Q8IV20 430 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 PM20D2Q8IYS1 436 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 CDC26Q8NHZ8 85 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 COL21A1Q96P44 957 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 SH3GL2Q99962 352 aa16.91■□□□□ 0.3
CLK1-211ENST00000481641 DOCK7Q96N67 2140 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 SYT5O00445 386 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 DVL2O14641 736 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 IL2RAP01589 272 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 SHBGP04278 402 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 ANXA4P09525 319 aaPredicted RBP16.9■□□□□ 0.3
CLK1-211ENST00000481641 CT45A8P0DMV1 189 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 CT45A9P0DMV2 189 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 TIMP3P35625 211 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 CT45A2Q5DJT8 189 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 SPDYAQ5MJ70 313 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 NSUN5P2Q63ZY6 315 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 OR7G2Q8NG99 324 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 C11orf24Q96F05 449 aaPredicted RBP16.9■□□□□ 0.3
CLK1-211ENST00000481641 ADOQ96SZ5 270 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 C12orf65Q9H3J6 166 aaKnown RBP16.9■□□□□ 0.3
CLK1-211ENST00000481641 FOLH1BQ9HBA9 442 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 TNFRSF12AQ9NP84 129 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 SLC35C2Q9NQQ7 365 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 CRIM1Q9NZV1 1036 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 DCDC2Q9UHG0 476 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 EXO1Q9UQ84 846 aaKnown RBP16.9■□□□□ 0.3
CLK1-211ENST00000481641 STK38LQ9Y2H1 464 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 MPDZO75970 2070 aa16.9■□□□□ 0.3
CLK1-211ENST00000481641 ANKHD1Q8IWZ3 2542 aaKnown RBP16.9■□□□□ 0.3
CLK1-211ENST00000481641 C17orf51A8MQB3 221 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 CDH16O75309 829 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 ERN1O75460 977 aaKnown RBP16.89■□□□□ 0.29
CLK1-211ENST00000481641 MYL2P10916 166 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 TCEA1P23193 301 aaKnown RBP16.89■□□□□ 0.29
CLK1-211ENST00000481641 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 SLCO1A2P46721 670 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 ASCL1P50553 236 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 SRYQ05066 204 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 C2orf80Q0P641 193 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 SNTA1Q13424 505 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 HEPACAMQ14CZ8 416 aa16.89■□□□□ 0.29
CLK1-211ENST00000481641 OR5M10Q6IEU7 315 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms