RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MCM8Q9UJA3 840 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 NFU1Q9UMS0 254 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 DLGAP4Q9Y2H0 992 aa13.91□□□□□ -0.18
LIMS3-203ENST00000480744 MED12LQ86YW9 2145 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 EEF1E1-BLOC1S5C9J1V9 151 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 EEF1E1O43324 174 aaKnown RBP13.9□□□□□ -0.18
LIMS3-203ENST00000480744 PCDH7O60245 1069 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 DLX3O60479 287 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 ULK1O75385 1050 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 REM1O75628 298 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 FAM153BP0C7A2 387 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 HSD3B1P14060 373 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 HSD3B2P26439 372 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 SOX18P35713 384 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 PEX19P40855 299 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 PPICP45877 212 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 EMDP50402 254 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 HTR6P50406 440 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF136P52737 540 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 IST1P53990 364 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 NAGLUP54802 743 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 DCAF7P61962 342 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 BTKQ06187 659 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 ACSM2AQ08AH3 577 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 RCAN2Q14206 197 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 FAM153CQ494X1 144 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 NHSL2Q5HYW2 709 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 ACSM2BQ68CK6 577 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 CCDC116Q8IYX3 515 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 OR14L1PQ8NHC6 308 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 KAT2AQ92830 837 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 TMBIM1Q969X1 311 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 CTHRC1Q96CG8 243 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF681Q96N22 645 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF382Q96SR6 550 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 EBPLQ9BY08 206 aa13.9□□□□□ -0.18
LIMS3-203ENST00000480744 CLEC4MQ9H2X3 399 aaPredicted RBP13.9□□□□□ -0.18
LIMS3-203ENST00000480744 ZNF629Q9UEG4 869 aaPredicted RBP13.9□□□□□ -0.18
LIMS3-203ENST00000480744 FRG2CA6NGY1 282 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 GOLGA8RI6L899 631 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 NME6O75414 186 aaPredicted RBP13.89□□□□□ -0.19
LIMS3-203ENST00000480744 ACTL6AO96019 429 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 CYP4B1P13584 511 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 DRD5P21918 477 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 ATP5F1P24539 256 aaPredicted RBP13.89□□□□□ -0.19
LIMS3-203ENST00000480744 GCAP28676 217 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 PTGDSP41222 190 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 HMGCS1Q01581 520 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 SRYQ05066 204 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 ERCC6LQ2NKX8 1250 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 FLYWCH1Q4VC44 716 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 ZNF628Q5EBL2 1059 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 FBXW10Q5XX13 1052 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 TIFABQ6ZNK6 161 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 OR9A2Q8NGT5 310 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 CDC26Q8NHZ8 85 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 TMCO6Q96DC7 493 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 RMND5BQ96G75 393 aaPredicted RBP13.89□□□□□ -0.19
LIMS3-203ENST00000480744 COL21A1Q96P44 957 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 ACPTQ9BZG2 426 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 LIME1Q9H400 295 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 GIMAP4Q9NUV9 329 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 SENP1Q9P0U3 644 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 TIMM22Q9Y584 194 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 ITPR3Q14573 2671 aa13.89□□□□□ -0.19
LIMS3-203ENST00000480744 MBD3L4A6NDZ8 208 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 MBD3L3A6NE82 208 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 MBD3L5A6NJ08 208 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 CD8B2A6NJW9 211 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 H0Y3Z8 333 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 CBR3O75828 277 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 BCAS2O75934 225 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 ABHD2P08910 425 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 DRD2P14416 443 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 IMPDH1P20839 514 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 TCEA1P23193 301 aaKnown RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 TACR1P25103 407 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 CTSSP25774 331 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 KRT20P35900 424 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 DGKQP52824 942 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 CORO7P57737 925 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 RAE1P78406 368 aaKnown RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 SNTA1Q13424 505 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 FBXL19-AS1Q494R0 122 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 SPIN4Q56A73 249 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 TMEM81Q6P7N7 255 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 POMZP3Q6PJE2 187 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 SCIMPQ6UWF3 145 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 SLC22A9Q8IVM8 553 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 WDSUB1Q8N9V3 476 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 C9orf106Q8NAJ2 232 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 GOT1L1Q8NHS2 421 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 MBD3L2Q8NHZ7 208 aaPredicted RBP13.88□□□□□ -0.19
LIMS3-203ENST00000480744 ZNF675Q8TD23 568 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 C16orf78Q8WTQ4 265 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 FAM222BQ8WU58 562 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 NTNG2Q96CW9 530 aa13.88□□□□□ -0.19
LIMS3-203ENST00000480744 APIPQ96GX9 242 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms