RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	WLS	Q5T9L3	541 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	COMMD6	Q7Z4G1	85 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	UBE3D	Q7Z6J8	389 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	MTERF4	Q7Z6M4	381 aa	Known RBP	14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	GPR180	Q86V85	440 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	KIF18B	Q86Y91	864 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	PHC2	Q8IXK0	858 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	ZNF595	Q8IYB9	648 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	FAM109A	Q8N4B1	249 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	C1orf52	Q8N6N3	182 aa	Known RBP	14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	PSD4	Q8NDX1	1056 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	NFAM1	Q8NET5	270 aa	Predicted RBP	14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	OR2M7	Q8NG81	312 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	STON2	Q8WXE9	905 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	SARAF	Q96BY9	339 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	MRPL1	Q9BYD6	325 aa	Known RBP	14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	TTTY12	Q9BZ98	90 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	C20orf27	Q9GZN8	174 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	MEAF6	Q9HAF1	191 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	DEPP	Q9NTK1	212 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	MRGBP	Q9NV56	204 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	PNPO	Q9NVS9	261 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	ACAD8	Q9UKU7	415 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	DAPP1	Q9UN19	280 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	PCDHGB3	Q9Y5G1	929 aa		14.33	□□□□□ -0.12
HDLBP-238	ENST00000479894	DSCAM	O60469	2012 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	FAM166B	A8MTA8	275 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	SAP18	O00422	153 aa	Known RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	PCDH7	O60245	1069 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	EDF1	O60869	148 aa	Known RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	SH3BGRL	O75368	114 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	SKAP2	O75563	359 aa	Predicted RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	ITGA10	O75578	1167 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	GLS	O94925	669 aa	Predicted RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	KLK1	P06870	262 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	FH	P07954	510 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	FAM58BP	P0C7Q3	252 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	PRPS2	P11908	318 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	TIA1	P31483	386 aa	Known RBP eCLIP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	RPL3	P39023	403 aa	Known RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	ASMT	P46597	345 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	CLCN2	P51788	898 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	RAB38	P57729	211 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	SORD	Q00796	357 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	GUCY1A3	Q02108	690 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	TBL3	Q12788	808 aa	Known RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	HEPACAM	Q14CZ8	416 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	XKR7	Q5GH72	579 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	SCIMP	Q6UWF3	145 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	QSOX2	Q6ZRP7	698 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	GK5	Q6ZS86	529 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	IKBIP	Q70UQ0	350 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	PDSS2	Q86YH6	399 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	SAMD14	Q8IZD0	417 aa	Predicted RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	TANK	Q92844	425 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894		Q96MF0	132 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	HBEGF	Q99075	208 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	RBCK1	Q9BYM8	510 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	NSRP1	Q9H0G5	558 aa	Known RBP	14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	TNFRSF12A	Q9NP84	129 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	MMACHC	Q9Y4U1	282 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	LIPG	Q9Y5X9	500 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894	USH1C	Q9Y6N9	552 aa		14.32	□□□□□ -0.12
HDLBP-238	ENST00000479894		A0A0A6YYD5	115 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	PINLYP	A6NC86	204 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	TMEM233	B4DJY2	109 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	SMAD7	O15105	426 aa	Known RBP	14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	ETHE1	O95571	254 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	HRG	P04196	525 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	ANXA4	P09525	319 aa	Predicted RBP	14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	KIT	P10721	976 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	BMP7	P18075	431 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	LBP	P18428	481 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	CPN2	P22792	545 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	CERS1	P27544	350 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	MAN2A2	P49641	1150 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	SSR4	P51571	173 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	LIM2	P55344	173 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	HSD17B7	P56937	341 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	EMX2	Q04743	252 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	BTK	Q06187	659 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	ZNF763	Q0D2J5	394 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	HYAL4	Q2M3T9	481 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	NOXRED1	Q6NXP6	359 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	C16orf47	Q6ZP98	133 aa	Predicted RBP	14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894		Q6ZSR9	355 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	SPATA19	Q7Z5L4	167 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	CA13	Q8N1Q1	262 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	APCDD1L	Q8NCL9	501 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	CEP70	Q8NHQ1	597 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	ACTRT2	Q8TDY3	377 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	DOCK7	Q96N67	2140 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	NUF2	Q9BZD4	464 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	TUBB1	Q9H4B7	451 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	NOP53	Q9NZM5	478 aa	Known RBP	14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	KCMF1	Q9P0J7	381 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	ZNF629	Q9UEG4	869 aa	Predicted RBP	14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	YARS2	Q9Y2Z4	477 aa	Known RBP	14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	CCL27	Q9Y4X3	112 aa		14.31	□□□□□ -0.12
HDLBP-238	ENST00000479894	TCRBV16S1A1N1	A0A5B0	115 aa		14.3	□□□□□ -0.12

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms