RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 LMLNQ96KR4 655 aa6.45□□□□□ -1.38
GAPVD1-217ENST00000479511 IL12RB2Q99665 862 aa6.45□□□□□ -1.38
GAPVD1-217ENST00000479511 FAM49AQ9H0Q0 323 aaPredicted RBP6.45□□□□□ -1.38
GAPVD1-217ENST00000479511 MEAF6Q9HAF1 191 aa6.45□□□□□ -1.38
GAPVD1-217ENST00000479511 AIPL1Q9NZN9 384 aa6.45□□□□□ -1.38
GAPVD1-217ENST00000479511 PLCL2Q9UPR0 1127 aa6.45□□□□□ -1.38
GAPVD1-217ENST00000479511 RBBP6Q7Z6E9 1792 aaKnown RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 CACNA1IQ9P0X4 2223 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 ERVV-2B6SEH9 535 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 SNNO75324 88 aaPredicted RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 NEBLO76041 1014 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 CHRNA1P02708 482 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 MT-ND1P03886 318 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 VTNP04004 478 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 ANXA4P09525 319 aaPredicted RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 CALB2P22676 271 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 CHI3L1P36222 383 aaPredicted RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 FEN1P39748 380 aaKnown RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 CDR2Q01850 454 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 TPD52L1Q16890 204 aaPredicted RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF699Q32M78 642 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 SPANXN4Q5MJ08 99 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF530Q6P9A1 599 aaPredicted RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 Q6ZVQ6 151 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 DND1Q8IYX4 353 aaKnown RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 DCLK2Q8N568 766 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 OR52K2Q8NGK3 314 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 FCAMRQ8WWV6 532 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 RLN3Q8WXF3 142 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 SLC25A36Q96CQ1 311 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 C2orf48Q96LS8 159 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 VSTM2LQ96N03 204 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 RAB11FIP5Q9BXF6 653 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 CAPS2Q9BXY5 557 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 BICC1Q9H694 974 aaKnown RBP6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 C3orf14Q9HBI5 128 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 GDAP2Q9NXN4 497 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 SLC6A5Q9Y345 797 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 AKAP11Q9UKA4 1901 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 ZNF521Q96K83 1311 aa6.44□□□□□ -1.38
GAPVD1-217ENST00000479511 CTAGE15A4D2H0 777 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 NPIPA2E9PIF3 369 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 C16orf97H3BN30 126 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 SIGLEC5O15389 551 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 STK17BO94768 372 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 LYNP07948 512 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 FAM157CP0CG43 387 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 MAT2AP31153 395 aaKnown RBP6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 CYLC1P35663 651 aaPredicted RBP6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 DCTP40126 519 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 AIF1P55008 147 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 CBX1P83916 185 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 LTBQ06643 244 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 SELPLGQ14242 412 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 CAMK4Q16566 473 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 ACSF3Q4G176 576 aaPredicted RBP6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 FAM106AQ4KMX7 169 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 ATP1A1-AS1Q5TC04 95 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 CST9Q5W186 159 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 DPY19L2P2Q6ZN68 376 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 Q6ZRG5 221 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 CTAGE6Q86UF2 777 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 IQCF1Q8N6M8 205 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 OR13A1Q8NGR1 328 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 PNPT1Q8TCS8 783 aaKnown RBP6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 MRPL24Q96A35 216 aaKnown RBP6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 HMCESQ96FZ2 354 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 SENP8Q96LD8 212 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 UHRF2Q96PU4 802 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 ATP13A3Q9H7F0 1226 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 KAT8Q9H7Z6 458 aaKnown RBP6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 EVA1AQ9H8M9 152 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 SLC25A19Q9HC21 320 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 STARD5Q9NSY2 213 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 MED17Q9NVC6 651 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 SPACA6W5XKT8 324 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 SYNRGQ9UMZ2 1314 aa6.43□□□□□ -1.38
GAPVD1-217ENST00000479511 H3BMH7 237 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 CCSO14618 274 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 SDC3O75056 442 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 SEC24AO95486 1093 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 SLC2A2P11168 524 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 HNF1AP20823 631 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 AADACP22760 399 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 CD38P28907 300 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 SOX3P41225 446 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 MTIF2P46199 727 aaKnown RBP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 FHITP49789 147 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 SGSHP51688 502 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 P2RY14Q15391 338 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 DCAF4L1Q3SXM0 396 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 WDR38Q5JTN6 314 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 PYHIN1Q6K0P9 492 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 SLC25A47Q6Q0C1 308 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 CWC27Q6UX04 472 aaKnown RBP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 C16orf82Q7Z2V1 217 aa6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 CIARTQ8N365 385 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-217ENST00000479511 CNBD1Q8NA66 436 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms