RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 H0Y8X5 98 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 SNX4O95219 450 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 CSF2P04141 144 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 SCG5P05408 212 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 HIST1H1TP22492 207 aaPredicted RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 ATP5A1P25705 553 aaKnown RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 CSTF2P33240 577 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS52-217ENST00000478934 TRHRP34981 398 aaPredicted RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 TRIM23P36406 574 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 AVPR1BP47901 424 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 GIPRP48546 466 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 OR2B6P58173 313 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 LRRC32Q14392 662 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 SYT14P1Q58G82 188 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 TUBA3EQ6PEY2 450 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 B3GLCTQ6Y288 498 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 ZNF513Q8N8E2 541 aaPredicted RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 GATAD2BQ8WXI9 593 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 QRFPRQ96P65 431 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 OR2A14Q96R47 310 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 TM9SF2Q99805 663 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 BTBD1Q9H0C5 482 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 ACSS1Q9NUB1 689 aaPredicted RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 MALT1Q9UDY8 824 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 PRKAG2Q9UGJ0 569 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 A0A087WUU8 490 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 TBX19O60806 448 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 CLEC3AO75596 197 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 HNRNPA0Q13151 305 aaKnown RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 SNAPC1Q16533 368 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 MFSD4BQ5TF39 518 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 USP30Q70CQ3 517 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 SLC30A8Q8IWU4 369 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 CAMKK1Q8N5S9 505 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 SCAIQ8N9R8 606 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 OR2L3Q8NG85 312 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 OR52I1Q8NGK6 324 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 SLC9A6Q92581 669 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 RAB7BQ96AH8 199 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 FAM46AQ96IP4 442 aaKnown RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 ZNF582Q96NG8 517 aaPredicted RBP10.16□□□□□ -0.78
VPS52-217ENST00000478934 NEK6Q9HC98 313 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 FGF22Q9HCT0 170 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 ABCB9Q9NP78 766 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 SEMA4GQ9NTN9 838 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 UGT2A1Q9Y4X1 527 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 V9GYH0 126 aa10.16□□□□□ -0.78
VPS52-217ENST00000478934 CENPVL1A0A0U1RR11 272 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 POM121BA6NF01 834 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 BTN3A3O00478 584 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 MYL12BO14950 172 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 LINC01565O15544 149 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 DYRK3O43781 588 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 MPZL2O60487 215 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 PDE9AO76083 593 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 LGI1O95970 557 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 PSMA1P25786 263 aaKnown RBP10.15□□□□□ -0.78
VPS52-217ENST00000478934 PKLRP30613 574 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 SOX18P35713 384 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 IGFALSP35858 605 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 PBX2P40425 430 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 GSTM5P46439 218 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 BTN3A2P78410 334 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 ID2Q02363 134 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 TEKQ02763 1124 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 TFF2Q03403 129 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 ZIC1Q15915 447 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 PARM1Q6UWI2 310 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 RTL10Q7L3V2 364 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 GLCCI1Q86VQ1 547 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 PHC2Q8IXK0 858 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 C7orf61Q8IZ16 206 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 NANOGP1Q8N7R0 232 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 OR8J1Q8NGP2 316 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 C9orf43Q8TAL5 461 aaPredicted RBP10.15□□□□□ -0.78
VPS52-217ENST00000478934 TM9SF4Q92544 642 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 FGF14Q92915 247 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 YIPF2Q9BWQ6 316 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 RACGAP1Q9H0H5 632 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 PCBD2Q9H0N5 130 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 RSPH9Q9H1X1 276 aaPredicted RBP10.15□□□□□ -0.78
VPS52-217ENST00000478934 DDX28Q9NUL7 540 aaKnown RBP10.15□□□□□ -0.78
VPS52-217ENST00000478934 MKLN1Q9UL63 735 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 ACSL5Q9ULC5 683 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.15□□□□□ -0.78
VPS52-217ENST00000478934 SPIN1Q9Y657 262 aaPredicted RBP10.15□□□□□ -0.78
VPS52-217ENST00000478934 GON4LQ3T8J9 2241 aa10.15□□□□□ -0.78
VPS52-217ENST00000478934 A0A1W2PQ09 198 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 A0A1W2PRQ8 180 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 ISM1B1AKI9 464 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 APOA1P02647 267 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 EN2P19622 333 aaPredicted RBP10.15□□□□□ -0.79
VPS52-217ENST00000478934 NTSP30990 170 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 RFX2P48378 723 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 PPP2CBP62714 309 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 PPP2CAP67775 309 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 UBE3AQ05086 875 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 SGCGQ13326 291 aa10.15□□□□□ -0.79
VPS52-217ENST00000478934 RPE65Q16518 533 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms