RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 EBF4Q9BQW3 602 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 TRIM45Q9H8W5 580 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-215ENST00000478531 NPHS2Q9NP85 383 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 AGPAT4Q9NRZ5 378 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 ACSS1Q9NUB1 689 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-215ENST00000478531 OLAHQ9NV23 265 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 AIG1Q9NVV5 245 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 C19orf53Q9UNZ5 99 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-215ENST00000478531 OR10H1Q9Y4A9 318 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 NPFFR2Q9Y5X5 522 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 POLEQ07864 2286 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 GTF3C1Q12789 2109 aa6.36□□□□□ -1.39
BRCA1-215ENST00000478531 SPTBN1Q01082 2364 aaKnown RBP6.36□□□□□ -1.39
BRCA1-215ENST00000478531 HECTD1Q9ULT8 2610 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 A0A087WV62 115 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FRG2CA6NGY1 282 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 KLRC4-KLRK1H3BQV0 150 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 UBDO15205 165 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ATP8B1O43520 1251 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PEX1O43933 1283 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 IDO1P14902 403 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ZNF24P17028 368 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FRKP42685 505 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 KIR3DL1P43629 444 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 UQCRFS1P47985 274 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 RFX3P48380 749 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TMED10P49755 219 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CLNS1AP54105 237 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 UFM1P61960 85 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 DCAF7P61962 342 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SF3A3Q12874 501 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TP53BP2Q13625 1128 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ZNHIT3Q15649 155 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ZNF791Q3KP31 576 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 LSM12Q3MHD2 195 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FAM174BQ3ZCQ3 159 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SPANXN4Q5MJ08 99 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 BICRALQ6AI39 1079 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 RPUSD3Q6P087 351 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 EPGNQ6UW88 154 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 LYPD8Q6UX82 237 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 NPSR1Q6W5P4 371 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ATCAYQ86WG3 371 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SULF2Q8IWU5 870 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 LRRC34Q8IZ02 419 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CLECL1Q8IZS7 167 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 GOLM1Q8NBJ4 401 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 C17orf47Q8NEP4 570 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 NUP43Q8NFH3 380 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 OR5AK3PQ8NH89 298 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CEP70Q8NHQ1 597 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ACTRT2Q8TDY3 377 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TMBIM1Q969X1 311 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TP53INP1Q96A56 240 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 OMA1Q96E52 524 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 OTUB1Q96FW1 271 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CHMP6Q96FZ7 201 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 MAELQ96JY0 434 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SGCZQ96LD1 299 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TEX37Q96LM6 180 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 JSRP1Q96MG2 331 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 VSTM2LQ96N03 204 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 MS4A4EQ96PG1 132 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 BTBD9Q96Q07 612 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ZBTB18Q99592 522 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 YIPF4Q9BSR8 244 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 BHLHE41Q9C0J9 482 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CLMPQ9H6B4 373 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TCF7L2Q9NQB0 619 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SACM1LQ9NTJ5 587 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 DEPPQ9NTK1 212 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ZCCHC3Q9NUD5 404 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 DCTN4Q9UJW0 460 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 VPS4AQ9UN37 437 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PCDHGB6Q9Y5F9 930 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 SETXQ7Z333 2677 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 A0A0G2JND7 137 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 FAM166BA8MTA8 275 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CAPN14A8MX76 684 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PLOD2O00469 737 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CDK2AP1O14519 115 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TP53I11O14683 189 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TFECO14948 347 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ANKRD28O15084 1053 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 ACOX3O15254 700 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 EDF1O60869 148 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PEX14O75381 377 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 TGDSO95455 350 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CRYABP02511 175 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 VIMP08670 466 aaKnown RBP6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CT45A8P0DMV1 189 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 CT45A9P0DMV2 189 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 GNLYP22749 145 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 IL12BP29460 328 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 KRT20P35900 424 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PIGAP37287 484 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 PPICP45877 212 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 DNASE1L1P49184 302 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 IDH3AP50213 366 aa6.35□□□□□ -1.39
BRCA1-215ENST00000478531 DGKQP52824 942 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms