RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, human

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-209	ENST00000478085	TMEM236	Q5W0B7	351 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CCDC115	Q96NT0	180 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TTTY10	Q9BZA0	68 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF304	Q9HCX3	659 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ABCB9	Q9NP78	766 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TUBA8	Q9NY65	449 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF225	Q9UK10	706 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	PPT2	Q9UMR5	302 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	PTPRF	P10586	1907 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TCRBV3S1	A0A5B6	114 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085		K7EQS6	105 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	GREM1	O60565	184 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	MYF5	P13349	255 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF823	P16415	610 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	KRR1	Q13601	381 aa	Known RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CXXC5	Q7LFL8	322 aa	Known RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	NLRP8	Q86W28	1048 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	OR52R1	Q8NGF1	315 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	OR5T3	Q8NGG3	340 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	NAT6	Q93015	286 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TCTN2	Q96GX1	697 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF300	Q96RE9	604 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	S100A13	Q99584	98 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	MAGIX	Q9H6Y5	334 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CNOT11	Q9UKZ1	510 aa	Known RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ICK	Q9UPZ9	632 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF638	Q14966	1978 aa	Known RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	IGLV3-16	A0A075B6K0	115 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CXorf51A	A0A1B0GTR3	108 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	WASHC1	A8K0Z3	465 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	GAPDHS	O14556	408 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CPM	P14384	443 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	PCGF2	P35227	344 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	GBX1	Q14549	363 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	NR0B2	Q15466	257 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	COX20	Q5RI15	118 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	SLC27A4	Q6P1M0	643 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	WASH2P	Q6VEQ5	465 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	SYT13	Q7L8C5	426 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TMEM151A	Q8N4L1	468 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	FBXL6	Q8N531	539 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	OR2A1	Q8NGT9	310 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ADO	Q96SZ5	270 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	EPYC	Q99645	322 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TREX2	Q9BQ50	279 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	OSBPL10	Q9BXB5	764 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	SEC61A2	Q9H9S3	476 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CENPM	Q9NSP4	180 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CUTC	Q9NTM9	273 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TNFRSF10D	Q9UBN6	386 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	RIMS3	Q9UJD0	308 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	OTOF	Q9HC10	1997 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	FAAH	O00519	579 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	VILL	O15195	856 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	PRAMEF10	O60809	474 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	DBI	P07108	87 aa	Known RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	C8B	P07358	591 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF3	P17036	446 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	TRA2B	P62995	288 aa	Known RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	BTBD16	Q32M84	506 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	DDI2	Q5TDH0	399 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	EFHD2	Q96C19	240 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CDX2	Q99626	313 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	SGPP1	Q9BX95	441 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	GLIPR2	Q9H4G4	154 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	GORASP2	Q9H8Y8	452 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CD93	Q9NPY3	652 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	C1GALT1	Q9NS00	363 aa		11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	WSB2	Q9NYS7	404 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	CRNN	Q9UBG3	495 aa	Predicted RBP	11.17	□□□□□ -0.62
SGSM3-209	ENST00000478085	OR5K3	A6NET4	321 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085		H3BSH0	61 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	PRAMEF2	O60811	474 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	ST6GAL1	P15907	406 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	CHRNE	Q04844	493 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	ST3GAL4	Q11206	333 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	ALG10B	Q5I7T1	473 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	IZUMO1	Q8IYV9	350 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	SYNPO	Q8N3V7	929 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	SMRP1	Q8NCR6	262 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	PROKR2	Q8NFJ6	384 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	OR51Q1	Q8NH59	317 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	C19orf43	Q9BQ61	176 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	SPNS1	Q9H2V7	528 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	PTGES2	Q9H7Z7	377 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	TLX3	O43711	291 aa	Predicted RBP	11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	REN	P00797	406 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF24	P17028	368 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	GCGR	P47871	477 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	CRISP1	P54107	249 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	RPS15	P62841	145 aa	Known RBP	11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF846	Q147U1	533 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	PON3	Q15166	354 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	TPRG1L	Q5T0D9	272 aa		11.16	□□□□□ -0.62
SGSM3-209	ENST00000478085	ZNF547	Q8IVP9	402 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms