RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 TUBAL3A6NHL2 446 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 HOXA2O43364 376 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 LIMS3P0CW19 117 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 LIMS4P0CW20 117 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 OR12D1P0DN82 309 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 TIA1P31483 386 aaKnown RBP eCLIP12.68□□□□□ -0.38
DFFB-209ENST00000477548 ACSL1P33121 698 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 MMP12P39900 470 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 GIPRP48546 466 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SLC11A2P49281 568 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 MRPS6P82932 125 aaKnown RBP12.68□□□□□ -0.38
DFFB-209ENST00000477548 ZNF33BQ06732 778 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 DUSP6Q16828 381 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 ST3GAL2Q16842 350 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 FAM26DQ5JW98 314 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 REEP3Q6NUK4 255 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 TCTN3Q6NUS6 607 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 RBM45Q8IUH3 476 aaKnown RBP12.68□□□□□ -0.38
DFFB-209ENST00000477548 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 ASB11Q8WXH4 323 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 PPCDCQ96CD2 204 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 ZNF416Q9BWM5 594 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 TM6SF2Q9BZW4 377 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 LINC00597Q9H2U6 94 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 IFT22Q9H7X7 185 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 FGF20Q9NP95 211 aaPredicted RBP12.68□□□□□ -0.38
DFFB-209ENST00000477548 CYSLTR2Q9NS75 346 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 ZFR2Q9UPR6 939 aaKnown RBP12.68□□□□□ -0.38
DFFB-209ENST00000477548 CSNK1G3Q9Y6M4 447 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 GREB1Q4ZG55 1949 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 KRBOX1C9JBD0 128 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 CASC3O15234 703 aaKnown RBP12.68□□□□□ -0.38
DFFB-209ENST00000477548 PRODHO43272 600 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 EIF4EP06730 217 aaKnown RBP12.68□□□□□ -0.38
DFFB-209ENST00000477548 SULT1A3P0DMM9 295 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SULT1A4P0DMN0 295 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 AKR1A1P14550 325 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 ELNP15502 786 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 F8A1P23610 371 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 OPRD1P41143 372 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 FLT3LGP49771 235 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 MC1RQ01726 317 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 OPCMLQ14982 345 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 TFAP2EQ6VUC0 442 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 VRK3Q8IV63 474 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 TOMM5Q8N4H5 51 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 ADAMTS19Q8TE59 1207 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 MED8Q96G25 268 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 METTL17Q9H7H0 456 aaPredicted RBP12.68□□□□□ -0.38
DFFB-209ENST00000477548 ZNF175Q9Y473 711 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 GSAPA4D1B5 854 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 MTMR11A4FU01 709 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 HRO43593 1189 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 FGF18O76093 207 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 BCHEP06276 602 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 H2AFB2P0C5Z0 115 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 PEPDP12955 493 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 C4BPBP20851 252 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SPAM1P38567 509 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 THPOP40225 353 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 CCR6P51684 374 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SGSHP51688 502 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 GAS1P54826 345 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SEMG2Q02383 582 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 TAP2Q03519 686 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 RIPPLY1Q0D2K3 151 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 GPR33Q49SQ1 333 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 HSD17B12Q53GQ0 312 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 WASH2PQ6VEQ5 465 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SLC36A4Q6YBV0 504 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 C3P1Q6ZMU1 363 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SLC7A13Q8TCU3 470 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 WBP1Q96G27 269 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SLC6A15Q9H2J7 730 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 BRD7Q9NPI1 651 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 PCDHB16Q9NRJ7 776 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 PTGFRNQ9P2B2 879 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 PCDHB8Q9UN66 801 aa12.68□□□□□ -0.38
DFFB-209ENST00000477548 SLC22A23A1A5C7 686 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 LGALS8O00214 317 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 SMAD6O43541 496 aaKnown RBP12.67□□□□□ -0.38
DFFB-209ENST00000477548 MMP20O60882 483 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 SEMA7AO75326 666 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 ZNF8P17098 575 aaPredicted RBP12.67□□□□□ -0.38
DFFB-209ENST00000477548 CCND3P30281 292 aaPredicted RBP12.67□□□□□ -0.38
DFFB-209ENST00000477548 SLC1A3P43003 542 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 MBTPS1Q14703 1052 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 CXorf57Q6NSI4 855 aaKnown RBP12.67□□□□□ -0.38
DFFB-209ENST00000477548 LRFN4Q6PJG9 635 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 THOC6Q86W42 341 aaKnown RBP12.67□□□□□ -0.38
DFFB-209ENST00000477548 ADAMTS14Q8WXS8 1223 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 CXorf58Q96LI9 332 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 SFXN2Q96NB2 322 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 TRPM7Q96QT4 1865 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 UBL7Q96S82 380 aaPredicted RBP12.67□□□□□ -0.38
DFFB-209ENST00000477548 CHIAQ9BZP6 476 aa12.67□□□□□ -0.38
DFFB-209ENST00000477548 ZNF436Q9C0F3 470 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms