RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SHISA6Q6ZSJ9 500 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 PPP1R3BQ86XI6 285 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF321PQ8N8H1 164 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 OR4D11Q8NGI4 311 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 SPPL2AQ8TCT8 520 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 PIK3R3Q92569 461 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 TRNT1Q96Q11 434 aaKnown RBP13.46□□□□□ -0.25
COL4A6-206ENST00000477085 BARD1Q99728 777 aaKnown RBP13.46□□□□□ -0.25
COL4A6-206ENST00000477085 AMBRA1Q9C0C7 1298 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 PIGUQ9H490 435 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 FBXO34Q9NWN3 711 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 PADI2Q9Y2J8 665 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 ZNF451Q9Y4E5 1061 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 MMACHCQ9Y4U1 282 aa13.46□□□□□ -0.25
COL4A6-206ENST00000477085 DSPPQ9NZW4 1301 aa13.46□□□□□ -0.26
COL4A6-206ENST00000477085 IGLV3-12A0A075B6K2 115 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 C4orf47A7E2U8 309 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 SEMA7AO75326 666 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 FESP07332 822 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ATP6V1C1P21283 382 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 RORAP35398 523 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 KCNJ5P48544 419 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ANXA11P50995 505 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 PGDP52209 483 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CRISP3P54108 245 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 TXNL4AP83876 142 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 FUT7Q11130 342 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 SERTAD2Q14140 314 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 NKAIN1Q4KMZ8 207 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 IFI44LQ53G44 452 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CCNJQ5T5M9 372 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 MFSD4BQ5TF39 518 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ARMC8Q8IUR7 673 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ZNF615Q8N8J6 731 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CDRT4Q8N9R6 151 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 AGBL5Q8NDL9 886 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CATSPER1Q8NEC5 780 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CLIP3Q96DZ5 547 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ZNF597Q96LX8 424 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 MESP1Q9BRJ9 268 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 LRFN3Q9BTN0 628 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 VN1R1Q9GZP7 353 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 TMEM9BQ9NQ34 198 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ERVK-19Q9WJR5 959 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 SH3GLB1Q9Y371 365 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CHST2Q9Y4C5 530 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 U3KQV3 271 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ASCC3Q8N3C0 2202 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 A0A0G2JPF8 293 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 TCRBV16S1A1N1A0A5B0 115 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 GXYLT2A0PJZ3 443 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 DUXAA6NLW8 204 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 A8MUA0 341 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 HNRNPCL2B2RXH8 293 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 HNRNPCL3B7ZW38 293 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 EI24O14681 340 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CNOT3O75175 753 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 RASAL1O95294 804 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ONECUT2O95948 504 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 IFNA14P01570 189 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 IFNA16P05015 189 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 HNRNPCL4P0DMR1 293 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ACADSP16219 412 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ZNF23P17027 643 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 GALNSP34059 522 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 DCTP40126 519 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 YAP1P46937 504 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 PSG6Q00889 435 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 MC2RQ01718 297 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 IL11RAQ14626 422 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ARHGAP11BQ3KRB8 267 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CCDC157Q569K6 752 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 OR2T5Q6IEZ7 315 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ZCCHC12Q6PEW1 402 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 FRRS1Q6ZNA5 592 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 RBM45Q8IUH3 476 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 LACC1Q8IV20 430 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 ZSCAN1Q8NBB4 408 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 OR2T29Q8NH02 315 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 BBS10Q8TAM1 723 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 STT3BQ8TCJ2 826 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 NAF1Q96HR8 494 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 VSTM2LQ96N03 204 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 SDF2Q99470 211 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 C9orf16Q9BUW7 83 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 SLC7A5P2Q9GIP4 190 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 TGIF2Q9GZN2 237 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 MKKSQ9NPJ1 570 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 PNO1Q9NRX1 252 aaKnown RBP13.45□□□□□ -0.26
COL4A6-206ENST00000477085 FAM86C1Q9NVL1 165 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 MKL2Q9ULH7 1088 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 LIPT1Q9Y234 373 aa13.45□□□□□ -0.26
COL4A6-206ENST00000477085 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
COL4A6-206ENST00000477085 TMEM247A6NEH6 219 aa13.44□□□□□ -0.26
COL4A6-206ENST00000477085 C17orf105B2RV13 164 aa13.44□□□□□ -0.26
COL4A6-206ENST00000477085 J3KTA2 159 aa13.44□□□□□ -0.26
COL4A6-206ENST00000477085 ALOX5P09917 674 aa13.44□□□□□ -0.26
COL4A6-206ENST00000477085 ETS2P15036 469 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms